Factsheet for HORVU3Hr1G083890.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome
Any Predictor:	peroxisome
MultiLoc:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G083840.1	Barley	mitochondrion, plastid	96.02	61.68
TraesCS3A01G374700.1	Wheat	vacuole	90.91	59.81
TraesCS3B01G406900.1	Wheat	vacuole	89.77	59.29
TraesCS3A01G374600.1	Wheat	vacuole	89.2	58.8
TraesCS3D01G367200.1	Wheat	vacuole	88.35	58.13
TraesCS3D01G367100.1	Wheat	vacuole	87.22	57.6
HORVU3Hr1G083860.2	Barley	mitochondrion, plastid	44.03	46.69
Zm00001d049536_P001	Maize	vacuole	70.74	45.77
KXG24484	Sorghum	plastid	70.17	45.24
HORVU2Hr1G008270.1	Barley	peroxisome	36.36	41.16
PGSC0003DMT400009569	Potato	cytosol	50.85	37.6
OQU79940	Sorghum	endoplasmic reticulum	58.81	37.23
GSMUA_Achr1P24050_001	Banana	golgi	47.73	35.44
KRG92465	Soybean	golgi, vacuole	49.72	31.82
KRH34335	Soybean	vacuole	49.43	31.64
HORVU1Hr1G091500.1	Barley	extracellular, vacuole	51.14	31.63
Solyc04g080400.1.1	Tomato	extracellular	50.57	31.56
HORVU7Hr1G089270.1	Barley	vacuole	44.89	29.7
HORVU1Hr1G092680.1	Barley	golgi, vacuole	45.17	29.66
HORVU7Hr1G089280.1	Barley	mitochondrion, peroxisome, plasma membrane	42.61	27.88
HORVU2Hr1G008330.1	Barley	extracellular, plasma membrane, vacuole	41.19	27.36
HORVU2Hr1G008300.1	Barley	plastid	40.62	27.19
HORVU7Hr1G093940.1	Barley	vacuole	39.49	26.23
HORVU2Hr1G000540.1	Barley	golgi, vacuole	40.34	26.15
HORVU2Hr1G021650.2	Barley	golgi, mitochondrion, plastid, vacuole	42.9	26.08
HORVU2Hr1G122590.1	Barley	vacuole	39.2	25.79
HORVU4Hr1G086520.1	Barley	plasma membrane, vacuole	37.78	25.73
HORVU7Hr1G089190.1	Barley	vacuole	38.35	25.71
HORVU7Hr1G026630.1	Barley	plastid	36.93	25.64
HORVU2Hr1G008310.1	Barley	golgi, vacuole	39.49	25.6
HORVU7Hr1G089160.3	Barley	vacuole	38.07	25.52
HORVU4Hr1G017270.1	Barley	vacuole	39.2	25.41
HORVU3Hr1G020240.1	Barley	extracellular, plasma membrane, vacuole	38.07	25.28
HORVU2Hr1G013930.1	Barley	golgi, vacuole	39.2	25.27
HORVU4Hr1G062830.1	Barley	mitochondrion, peroxisome, plasma membrane	40.91	24.78
HORVU2Hr1G000530.1	Barley	plasma membrane, vacuole	28.98	23.29
HORVU7Hr1G089210.1	Barley	mitochondrion	39.49	22.64
HORVU7Hr1G089260.1	Barley	mitochondrion	23.3	16.87
VIT_18s0089g01200.t01	Wine grape	plasma membrane	52.56	16.02

Protein Annotations

Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	UniProt:A0A287M082	InterPro:BBE	InterPro:FAD-bd_2
InterPro:FAD-bd_2-like_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016614	GO:GO:0050660	GO:GO:0055114	GO:GO:0071949
EnsemblPlantsGene:HORVU3Hr1G083890	EnsemblPlants:HORVU3Hr1G083890.1	InterPro:IPR016166	PFAM:PF08031	PFscan:PS51387	PANTHER:PTHR32448
PANTHER:PTHR32448:SF52	SUPFAM:SSF56176	UniParc:UPI000B461221	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr3H:+:605442761..605443937

Molecular Weight (calculated)

38956.8 Da

IEP (calculated)

6.698

GRAVY (calculated)

-0.335

Length

352 amino acids

Sequence
(BLAST)

001: GGFGLLSRKF GLAADNVLDA ALITSDGRIH DRSSMGDDVF WAIRGGGGGS WGVVYAWKLR LVPVPRNVTV FTVDRTGPVE LIAGLVHRWQ YVGPNLPDEY
101: YLSVYAPTGS TEGNVSISFT GQVLESKEHA LSVLSQSFPE LGLTEEDLSE MSWIESTAKF AGLSTVDDLA KRRRQPKQYS KSKSDYVQEP ISRNDMVEIF
201: RYLSTGPTGS IQLDPYGGAM ARIGRAETPF PHRAGNLYSI QYGVNWDRSE VARAEEYIGW LRSFYKYMTP LVSKDPRAAY VNYLDLDLGL NNWTRAAGGS
301: SAQAVARARS SWGHAYFGEN FDRLVRAKMV VDPSNVFNNA QSIPPLNSRA EE

Best Arabidopsis Sequence Match ( AT1G30760.1 )
(BLAST)

001: MAFVLMNNTN AFLVTLLLLS LSYIPLSFST IQQDFVMCLV DNSDASFPMD SSFFTHDLNA SSFKLALETS AQNLRYLMPS NPKPEFIFEP LYETHVQAAV
101: LCAKKLKLHL RLRSGGHDYE GLSYVSEMET AFVIVDLSKL RQISVDIESN SAWVHAGASI GEVYYRIQEK SKIHGFPAGL CTSLGIGGHI IGGAYGSMMR
201: KFGLGADNVL DARIVDADGK ILNRAAMGED VFWAIRGGGG GSFGVILAWK IKLVPVPEIV TVFTVTRTLE QDGTKLLYKW QQVADKLDED LFIRVIIQPT
301: SKTPKSKERT ISTSYQGQFL GDANRLLQVM QRSFPQLGLT KKDCLETSWI KSVMYIAGFP STAPSEALLD GKSLFKNYFK AKSDYVEEPI PVEGLEGLWE
401: KLLEEDSPLT IWNPYGGMMA KIPETETPFP HRSGTLFKIQ WLTLWQDGKT SEAKHMGWMR EMYSYMEQYV SKSPRSAYVN YRDLDLGMNG KGSDAREWGN
501: RYFKGNFERL VEIKAKFDPE NFFRHEQSIP TELE

Arabidopsis Description

FAD-binding Berberine family protein [Source:TAIR;Acc:AT1G30760]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.