Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- endoplasmic reticulum 1
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os08t0539300-01 | Rice | nucleus | 42.57 | 40.57 |
| GSMUA_AchrUn_... | Banana | nucleus | 26.49 | 24.49 |
| GSMUA_Achr8P17150_001 | Banana | cytosol, golgi, nucleus, plastid | 11.39 | 20.44 |
| Os05t0154600-01 | Rice | nucleus | 21.04 | 19.5 |
| Os01t0350900-02 | Rice | cytosol, nucleus, plasma membrane | 20.54 | 18.24 |
| GSMUA_Achr8P17170_001 | Banana | vacuole | 14.11 | 16.96 |
Protein Annotations
| EMBL:AK072997 | EnsemblPlants:Os09t0511500-01 | EnsemblPlantsGene:Os09g0511500 | EntrezGene:4347544 | Gene3D:3.30.40.10 | InterPro:IPR001841 |
| InterPro:IPR013083 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF37 | PFAM:PF13639 |
| PFscan:PS50089 | ProteinID:BAF25551.1 | ProteinID:BAT08911.1 | RefSeq:XP_015612644.1 | SEG:seg | SMART:SM00184 |
| SUPFAM:SSF57850 | UniParc:UPI0000DD980C | UniProt:Q0J0G4 | MapMan:19.2.2.1.5.3.3 | : | : |
Description
Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os09t0511500-01)
Coordinates
chr9:+:19878398..19882134
Molecular Weight (calculated)
44094.9 Da
IEP (calculated)
6.655
GRAVY (calculated)
-0.568
Length
404 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFAAEPMDL EVSPDSSPAA AAAAAVCSIC LDAVACGDGV AARSTARLQC GHEFHLDCIG SAFNAKGVMQ CPNCRNIEKG HWLYGNESQP CSHSDTGDWL
101: NGETFDYPFS FEFGWCPFNT PLTSVFGESE SEPNPFLEYI GSLHGFHHPM YAPSSSTAST ESIPFHQRPT GTEGHATTDL RNTQVFNESE PRNHEREQQY
201: LGSVQMPGTL NHSTAPFGIG MPRYDGGNQQ RLRPHMHDNS LFHRPTARRA SNLAHLRSLT AASETRGHGH GMTSHAVQQT IPSSMASNPQ PPATRRVRPR
301: ALSITSFIAA SSSAEIRAPH DFPLTETAST TNGNIRNGVG APRHANQSYS WSSETFWPQT GEPHWWSPMA PVHNRSYDNF SGRSATELLS IYGAQNGLPT
401: PRFL
101: NGETFDYPFS FEFGWCPFNT PLTSVFGESE SEPNPFLEYI GSLHGFHHPM YAPSSSTAST ESIPFHQRPT GTEGHATTDL RNTQVFNESE PRNHEREQQY
201: LGSVQMPGTL NHSTAPFGIG MPRYDGGNQQ RLRPHMHDNS LFHRPTARRA SNLAHLRSLT AASETRGHGH GMTSHAVQQT IPSSMASNPQ PPATRRVRPR
301: ALSITSFIAA SSSAEIRAPH DFPLTETAST TNGNIRNGVG APRHANQSYS WSSETFWPQT GEPHWWSPMA PVHNRSYDNF SGRSATELLS IYGAQNGLPT
401: PRFL
001: MAGAKDSGCD DDLRIAGGCD PGKRGNPEDS SSPVEVSCSI CLESVLDDGT RSKAKLQCGH QFHLDCIGSA FNMKGAMQCP NCRNVEKGQW LYANGSTRPF
101: PEFSMEDWIP EEDLYGLSYP EMQYRVHWCP FGELSQAAAS FEELEPATTT YHTEFHGHHA AAVNHSYLAY VGPGPAATPR TSDNNSTDDH PWNSHSNDHF
201: HQLPVAPQYH HHSPSFSLPA AHVVDGEVDS SAARGLPYAH PFLFSHRSNQ RSSPAINSYQ GSSTQMREQH HAYNHQRQQH HANGPTLASP LISMTRRGLP
301: PPPPPPPMPD QNVGFFIYPG GHHEPETDQI HAWERDWFPH FPVPSNHRTI PSLWHRHF
101: PEFSMEDWIP EEDLYGLSYP EMQYRVHWCP FGELSQAAAS FEELEPATTT YHTEFHGHHA AAVNHSYLAY VGPGPAATPR TSDNNSTDDH PWNSHSNDHF
201: HQLPVAPQYH HHSPSFSLPA AHVVDGEVDS SAARGLPYAH PFLFSHRSNQ RSSPAINSYQ GSSTQMREQH HAYNHQRQQH HANGPTLASP LISMTRRGLP
301: PPPPPPPMPD QNVGFFIYPG GHHEPETDQI HAWERDWFPH FPVPSNHRTI PSLWHRHF
Arabidopsis Description
RFI2E3 ubiquitin-protein ligase RFI2 [Source:UniProtKB/Swiss-Prot;Acc:O82239]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.