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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, plastid, nucleus, cytosol

Predictor Summary:
  • plastid 3
  • mitochondrion 1
  • nucleus 2
  • cytosol 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, golgi, nucleus, plastid
Any Predictor:cytosol, golgi, mitochondrion, nucleus, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:plastid
TargetP:plastid
WoLF PSORT:cytosol
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_AchrUn_... Banana nucleus 40.89 21.05
GSMUA_Achr2P02250_001 Banana nucleus 27.11 20.54
GSMUA_Achr5P27050_001 Banana nucleus 29.33 15.87
OQU80800 Sorghum nucleus 26.22 13.82
TraesCS7A01G268500.1 Wheat cytosol 24.89 13.08
Zm00001d031684_P001 Maize cytosol 24.0 13.04
TraesCS7D01G266300.1 Wheat cytosol 24.89 13.02
TraesCS7B01G163800.1 Wheat cytosol 24.44 12.79
Zm00001d052697_P002 Maize cytosol 24.44 12.79
GSMUA_Achr8P06630_001 Banana nucleus 30.22 12.76
Os08t0539300-01 Rice nucleus 23.11 12.26
Os09t0511500-01 Rice cytosol, endoplasmic reticulum, nucleus 20.44 11.39
GSMUA_Achr8P17170_001 Banana vacuole 4.44 2.98
Protein Annotations
EnsemblPlants:GSMUA_Achr8P17150_001EnsemblPlants:GSMUA_Achr8T17150_001EnsemblPlantsGene:GSMUA_Achr8G17150_001Gene3D:3.30.40.10InterPro:IPR001841InterPro:IPR013083
InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDPANTHER:PTHR22937PANTHER:PTHR22937:SF37PFAM:PF13639PFscan:PS50089
SEG:segSMART:SM00184SUPFAM:SSF57850UniParc:UPI000296D3D5UniProt:M0TR68MapMan:19.2.2.1.5.3.3
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G17150_001]
Coordinates
chr8:+:16336601..16343851
Molecular Weight (calculated)
24611.3 Da
IEP (calculated)
7.996
GRAVY (calculated)
-0.139
Length
225 amino acids
Sequence
(BLAST)
001: MEKHGFISSG DKSLKQVTIS RSSICPNTSA SALGLSPLSL PAFSFLWLGF FLHGGSNRGS RSRLPRAFIQ DLGSAIGGRG VLMNDSKAMD LEKTEFSSDG
101: KGAAAAPACS ICLELVLDQG RRSTAKLQCG HEFHLDCIGS AFNAKGAMQC PNCRKVEKGR WLYANGNRSS ADFDIDGWVT EDIYDLGYSE LVCFIWTSNL
201: LGKVDHNSFL DYFMTWRKIN SVVMN
Best Arabidopsis Sequence Match ( AT3G05545.1 )
(BLAST)
001: MGLGNKGNKF NFGDNDLADE ASGADGDEGD GFGSVACSIC LETVVKNGDR AWANLQCDHQ FHLDCIGSAF NAKGVMQCPN CRKVEKGQWL YANGCRSYPE
101: FNVEDWVHEE DIYDIGAYSE MSFGVHWCPF GSSARLPSFE DGEFSPSSYH DLLGQQGYYT EPAAPTAGHP CPYVTYFGPV HSPSSSSGGA AGVSDSSSFS
201: SHWNTGSSVS GEVPTPYGFP VDPHYHGWDY HPPPPPPPQH FSASGAHVGS PTQPTPPPAA ARTSRANGSD MIRPRPPHFT RPFHGHSSSG RAGSSVASVP
301: RTPPFPGSNA RTRDRMQALQ AYYQQSSAQS HQPDSPIVSR GPVFPSGRRP ARGIASGMGS TSSSSDQAGG SGFIRFNIWE RDPYMQSQQA YSVNQMDREP
401: NIWTSSFNEG SGSFHQRHGG GGGSS
Arabidopsis Description
RING finger family protein [Source:UniProtKB/TrEMBL;Acc:Q84WW4]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.