Factsheet for Os12t0552200-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

plastid 5
cytosol 1
vacuole 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0393900-01	Rice	mitochondrion	53.02	54.86
Os09t0462400-00	Rice	cytosol	38.26	50.0
Os11t0614400-01	Rice	plasma membrane	44.52	47.72
Os11t0614500-02	Rice	cytosol	23.49	42.86
Os08t0376550-00	Rice	cytosol	17.23	42.54
Os08t0476900-01	Rice	plastid	40.27	41.86
Os08t0477100-01	Rice	plastid	39.82	41.3
Os08t0376500-00	Rice	plastid	23.71	40.77
Os08t0477500-01	Rice	plasma membrane	24.38	40.52
Os01t0898500-01	Rice	plastid	34.68	37.71
Os03t0640000-00	Rice	cytosol	20.13	20.41
Os03t0254400-01	Rice	cytosol	20.58	19.62
Os03t0784100-00	Rice	cytosol	20.58	19.57
Os07t0144500-00	Rice	mitochondrion, plastid	15.66	16.83
Os06t0677000-00	Rice	plastid	16.55	15.38
Os12t0611300-00	Rice	cytosol, peroxisome, plastid	16.78	14.37

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.3	UniProt:A0A0P0YBC3	InterPro:Acyl_Trfase/lysoPLipase	ProteinID:BAT17574.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016042
GO:GO:0016787	InterPro:IPR002641	EnsemblPlantsGene:Os12g0552200	EnsemblPlants:Os12t0552200-01	PFAM:PF01734	InterPro:PNPLA_dom
PFscan:PS51635	PANTHER:PTHR32176	PANTHER:PTHR32176:SF5	SUPFAM:SSF52151	UniParc:UPI0000DD9F07	SEG:seg

Description

Patatin-related phospholipase A II lambdaSimilar to Patatin-like phospholipase family protein. (Os12t0552200-01)

Coordinates

chr12:+:22417223..22419263

Molecular Weight (calculated)

49069.8 Da

IEP (calculated)

10.269

GRAVY (calculated)

-0.381

Length

447 amino acids

Sequence
(BLAST)

001: THTYQSDPSP TNDAFLHLCS SPPSLPASLQ CLRRRRSCVR RRRREGDRAD HRRRRHPRRH PGHGARVPGG RAPAAGWPGR EARRLLRCWL ITGGLITAML
101: AAPGEGADRD GRRRRRPMFA AADITPFYLE HGPRIFPQRW STLAAKIAAA RGPKYDGRYL RGVVRRMLGE TTVGDTLTNV VVPTFDVRLL QPVIFSTYEA
201: KNSPLKNALL SDVCIGTSSA PTYLPAHCFR THDGASGETR EYNLIDGGVA ANNPTMVAMT MITEEIMAKE KAAALYLLKP PPEEEEEHGR FLVLSIGTGL
301: TSDEGLYTAE KCSRWGALSW LRHGGMAPII DIFMAASSDL VDIHVAVKFQ LLHSERNYLR VQANSLRGAA AAVDAATPEN MGSLVGVGER LLAQRVSRVN
401: VETGRYEEVP GEGSNADALA RIAGNLSEER TARIKRRNTV QAGVTGF

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.