Factsheet for Os09t0462400-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
vacuole 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0950800-01
Os09t0462400-00
Os10t0580500-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G26560.1	Os01t0950800-01	AT1G34570.1	21798944
AT2G26560.1	Os10t0580500-00	AT1G34570.1	21798944
AT2G26560.1	Os09t0462400-00	AT2G26560.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G050060.10	Barley	plastid	56.43	74.81
TraesCS5D01G249800.1	Wheat	cytosol	86.84	73.33
HORVU3Hr1G101170.1	Barley	mitochondrion, plastid	42.98	73.13
TraesCS5A01G243200.1	Wheat	cytosol	86.26	72.84
TraesCS5B01G241100.2	Wheat	cytosol	86.84	72.79
HORVU5Hr1G069130.5	Barley	cytosol	85.38	72.1
KXG35787	Sorghum	cytosol	82.46	71.76
Zm00001d005911_P001	Maize	cytosol	82.75	70.4
HORVU2Hr1G060260.1	Barley	plastid	54.39	67.64
GSMUA_Achr11P...	Banana	cytosol	62.28	63.02
VIT_18s0001g10850.t01	Wine grape	cytosol	66.96	55.45
VIT_18s0001g10910.t01	Wine grape	cytosol	66.37	54.96
VIT_18s0001g10870.t01	Wine grape	cytosol	66.37	54.96
Bra000578.1-P	Field mustard	cytosol	64.62	54.57
CDY21469	Canola	cytosol, peroxisome, vacuole	64.62	54.3
CDX83197	Canola	cytosol	64.33	54.05
AT2G26560.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	63.74	53.56
KRH05708	Soybean	cytosol	57.89	52.52
KRH15338	Soybean	cytosol	62.28	52.21
KRH15334	Soybean	cytosol	61.99	51.96
VIT_18s0001g10930.t01	Wine grape	cytosol	46.49	50.8
KRH05709	Soybean	cytosol	60.53	50.74
VIT_18s0001g10830.t01	Wine grape	mitochondrion, plasma membrane, plastid	66.67	49.57
Os08t0477500-01	Rice	plasma membrane	37.43	47.58
Os08t0477100-01	Rice	plastid	57.89	45.94
Os08t0476900-01	Rice	plastid	56.73	45.12
Os11t0614400-01	Rice	plasma membrane	54.97	45.08
Os08t0376500-00	Rice	plastid	34.21	45.0
Os08t0376550-00	Rice	cytosol	22.51	42.54
Os03t0393900-01	Rice	mitochondrion	53.51	42.36
Os11t0614500-02	Rice	cytosol	29.24	40.82
VIT_18s0001g10900.t01	Wine grape	cytosol	23.1	39.3
Os12t0552200-01	Rice	cytosol, nucleus, plastid	50.0	38.26
Os01t0898500-01	Rice	plastid	45.91	38.2
Os03t0784100-00	Rice	cytosol	26.9	19.57
Os03t0254400-01	Rice	cytosol	26.02	18.98
Os03t0640000-00	Rice	cytosol	23.39	18.14
Os06t0677000-00	Rice	plastid	22.81	16.22
Os07t0144500-00	Rice	mitochondrion, plastid	16.96	13.94
Os12t0611300-00	Rice	cytosol, peroxisome, plastid	20.76	13.6

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.3	UniProt:A0A0P0XPE4	InterPro:Acyl_Trfase/lysoPLipase	ProteinID:BAT08488.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004620	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006629	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0008219	GO:GO:0009056
GO:GO:0009058	GO:GO:0009605	GO:GO:0009607	GO:GO:0009626	GO:GO:0009628	GO:GO:0009987
GO:GO:0016020	GO:GO:0016042	GO:GO:0016298	GO:GO:0016787	GO:GO:0031408	GO:GO:0046686
GO:GO:0047372	GO:GO:0051607	GO:GO:0071456	InterPro:IPR002641	EnsemblPlantsGene:Os09g0462400	EnsemblPlants:Os09t0462400-00
PFAM:PF01734	InterPro:PNPLA_dom	PFscan:PS51635	PANTHER:PTHR32176	PANTHER:PTHR32176:SF6	SUPFAM:SSF52151
UniParc:UPI00039386A8	:	:	:	:	:

Description

Patatin-related phospholipase A II etaSimilar to Patatin-like protein. (Os09t0462400-00)

Coordinates

chr9:+:17477528..17479148

Molecular Weight (calculated)

37809.6 Da

IEP (calculated)

8.442

GRAVY (calculated)

-0.175

Length

342 amino acids

Sequence
(BLAST)

001: FLKKLDGEEA RIADYFDVIA GTSTGGLVTA MLAAPNKKRR PLFAAKDIKA FYMNHAPKIF PQLRGPFGRM MRIFRSMSGP SYDGKHLHEV VREKLGSTRL
101: HQTLTNVVIP TFDIKWLQPT IFSSYEKKNN NTMDALLSDI CISTSAAPTY LPAHFFRTED CHGNIKEFNL IDGGVAANNP ALVAIGEVSK QIFKKNPDFF
201: PVKPMDYGRF LVISLGTGSP KIEGKYNAQK AKSWGVLDWL LVGGSTPLVD IFTQASADMV DIHIAAVFKV LHSEQNYLRI QDDTLEGTLA SVDVATRDNL
301: EKLANVGEIL LNKPVSRANL ETGQMMPACD DSEITNGEAL KR

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.