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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plastid
TargetP:plastid
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU2Hr1G060260.1
HORVU3Hr1G101170.1
HORVU3Hr1G107330.1
HORVU4Hr1G019140.24
HORVU4Hr1G050060.10
HORVU5Hr1G069130.5
HORVU7Hr1G009930.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G26560.1 HORVU3Hr1G107330.1 AT1G34570.1 21798944
AT2G26560.1 HORVU7Hr1G009930.1 AT1G34570.1 21798944
AT2G26560.1 HORVU2Hr1G060260.1 AT2G26560.1 21798944
AT2G26560.1 HORVU3Hr1G101170.1 AT2G26560.1 21798944
AT2G26560.1 HORVU4Hr1G019140.24 AT2G26560.1 21798944
AT2G26560.1 HORVU4Hr1G050060.10 AT2G26560.1 21798944
AT2G26560.1 HORVU5Hr1G069130.5 AT2G26560.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU4Hr1G050060.10 Barley plastid 88.36 94.19
HORVU3Hr1G101170.1 Barley mitochondrion, plastid 58.91 80.6
HORVU5Hr1G069130.5 Barley cytosol 88.0 59.75
Os09t0462400-00 Rice cytosol 67.64 54.39
Zm00001d005911_P001 Maize cytosol 74.55 50.99
KXG35787 Sorghum cytosol 70.91 49.62
GSMUA_Achr11P... Banana cytosol 60.0 48.82
VIT_18s0001g10910.t01 Wine grape cytosol 60.36 40.19
VIT_18s0001g10870.t01 Wine grape cytosol 60.36 40.19
VIT_18s0001g10850.t01 Wine grape cytosol 60.36 40.19
HORVU6Hr1G027900.2 Barley cytosol 46.18 37.03
CDX83197 Canola cytosol 54.55 36.85
Bra000578.1-P Field mustard cytosol 54.18 36.79
CDY21469 Canola cytosol, peroxisome, vacuole 54.18 36.61
VIT_18s0001g10830.t01 Wine grape mitochondrion, plasma membrane, plastid 60.73 36.3
KRH15338 Soybean cytosol 53.09 35.78
KRH15334 Soybean cytosol 52.73 35.54
AT2G26560.1 Thale cress cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 51.64 34.89
KRH05709 Soybean cytosol 50.91 34.31
KRH05708 Soybean cytosol 44.73 32.63
HORVU1Hr1G012140.1 Barley plastid 48.0 32.35
HORVU1Hr1G069200.2 Barley cytosol 46.55 31.53
HORVU4Hr1G075070.7 Barley plastid 49.09 31.03
HORVU2Hr1G029000.2 Barley cytosol 43.64 29.13
HORVU7Hr1G036460.1 Barley plasma membrane 48.36 29.1
VIT_18s0001g10930.t01 Wine grape cytosol 33.09 29.07
HORVU5Hr1G119820.1 Barley plastid 40.73 28.21
HORVU3Hr1G004220.4 Barley cytosol, plastid 49.09 28.12
HORVU7Hr1G006840.3 Barley cytosol 29.45 27.93
HORVU4Hr1G074970.1 Barley mitochondrion 42.55 27.73
HORVU7Hr1G113080.1 Barley cytosol 46.91 27.62
HORVU5Hr1G119810.5 Barley cytosol 38.55 27.46
VIT_18s0001g10900.t01 Wine grape cytosol 18.91 25.87
HORVU2Hr1G037280.1 Barley cytosol 17.82 18.99
HORVU6Hr1G001990.1 Barley cytosol 28.36 17.33
HORVU7Hr1G106600.4 Barley cytosol 16.0 17.12
HORVU4Hr1G019140.24 Barley cytosol 13.09 16.59
HORVU7Hr1G113030.2 Barley plastid 15.64 16.48
HORVU2Hr1G126660.1 Barley cytosol, nucleus 33.45 16.34
HORVU2Hr1G126570.1 Barley extracellular 17.45 13.45
HORVU5Hr1G011400.6 Barley mitochondrion 21.09 12.95
HORVU5Hr1G093250.4 Barley cytosol 20.0 12.22
HORVU5Hr1G103060.1 Barley mitochondrion 21.09 12.21
HORVU0Hr1G008670.3 Barley cytosol 16.36 11.14
Protein Annotations
EnsemblPlants:HORVU2Hr1G060260.1EnsemblPlantsGene:HORVU2Hr1G060260Gene3D:3.40.1090.10GO:GO:0003674GO:GO:0003824GO:GO:0006629
GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0016042GO:GO:0016787InterPro:Acyl_Trfase/lysoPLipase
InterPro:IPR002641InterPro:PNPLA_domPANTHER:PTHR32176PANTHER:PTHR32176:SF6PFscan:PS51635SEG:seg
SUPFAM:SSF52151UniParc:UPI000B46DC1CUniProt:A0A287I4X7MapMan:5.7.2.2.3::
Description
No Description!
Coordinates
chrchr2H:-:400912183..400913528
Molecular Weight (calculated)
30480.8 Da
IEP (calculated)
10.274
GRAVY (calculated)
-0.408
Length
275 amino acids
Sequence
(BLAST)
001: SPPPSPAGLL SGRHHAVRAD RGLRPANRRL SPPPLWRVRR VKKKKSTMDA LLSDICISMS AAPTYLPAHY FKTEDSHGNT KEFNLIDGGV AANNPALVAI
101: GEVSKQIFKQ DSDFFPIKPM DYGRFLVISL GTGSSKFEEK YDAQKAKSWG MLDWLLSSGS TPLVDIFTRA SADMVDIHIA SIFKALHSKK KYLRIQDDTL
201: RGTLSSVDVA TKDNMEKLVN VGVLLLKKPV SRANLETGQM VPTCSETEET NEEALKRFAK LLSDEKKIRQ ARSPK
Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)
001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI
Arabidopsis Description
PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.