Factsheet for HORVU2Hr1G126570.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
iPSORT:	plastid
MultiLoc:	extracellular
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G126660.1	Barley	cytosol, nucleus	79.83	50.62
TraesCS7A01G012900.1	Wheat	cytosol	74.51	48.45
HORVU7Hr1G006840.3	Barley	cytosol	21.01	25.86
HORVU3Hr1G101170.1	Barley	mitochondrion, plastid	12.89	22.89
HORVU7Hr1G113030.2	Barley	plastid	15.97	21.84
HORVU2Hr1G037280.1	Barley	cytosol	15.41	21.32
HORVU2Hr1G029000.2	Barley	cytosol	21.57	18.69
HORVU6Hr1G027900.2	Barley	cytosol	17.65	18.37
HORVU5Hr1G069130.5	Barley	cytosol	20.73	18.27
HORVU4Hr1G050060.10	Barley	plastid	13.17	18.22
HORVU4Hr1G074970.1	Barley	mitochondrion	21.29	18.01
HORVU5Hr1G119810.5	Barley	cytosol	19.33	17.88
HORVU1Hr1G012140.1	Barley	plastid	20.17	17.65
HORVU2Hr1G060260.1	Barley	plastid	13.45	17.45
HORVU1Hr1G069200.2	Barley	cytosol	19.61	17.24
HORVU4Hr1G019140.24	Barley	cytosol	10.36	17.05
HORVU5Hr1G119820.1	Barley	plastid	18.49	16.62
HORVU4Hr1G075070.7	Barley	plastid	20.17	16.55
Zm00001d042041_P001	Maize	cytosol	17.37	16.36
HORVU3Hr1G004220.4	Barley	cytosol, plastid	21.01	15.62
HORVU7Hr1G113080.1	Barley	cytosol	20.17	15.42
HORVU7Hr1G036460.1	Barley	plasma membrane	19.61	15.32
HORVU6Hr1G001990.1	Barley	cytosol	13.45	10.67
HORVU7Hr1G106600.4	Barley	cytosol	7.28	10.12
HORVU5Hr1G093250.4	Barley	cytosol	11.48	9.11
HORVU0Hr1G008670.3	Barley	cytosol	9.8	8.66
HORVU5Hr1G103060.1	Barley	mitochondrion	11.2	8.42
HORVU5Hr1G011400.6	Barley	mitochondrion	10.36	8.26
OQU84037	Sorghum	cytosol, extracellular, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU2Hr1G126570.1	EnsemblPlantsGene:HORVU2Hr1G126570	Gene3D:3.40.1090.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016042	GO:GO:0016787	InterPro:Acyl_Trfase/lysoPLipase
InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32176	PANTHER:PTHR32176:SF24	PFAM:PF01734	PFscan:PS51635
SEG:seg	SUPFAM:SSF52151	UniParc:UPI000B47DDB1	UniProt:A0A287JTT2	MapMan:35.1	:

Description

Patatin [Source:UniProtKB/TrEMBL;Acc:A0A287JTT2]

Coordinates

chrchr2H:+:763821584..763823891

Molecular Weight (calculated)

39048.6 Da

IEP (calculated)

8.213

GRAVY (calculated)

-0.288

Length

357 amino acids

Sequence
(BLAST)

001: MLAVGLAIEP LLRPILDALI HANGGGLQQL AAAPHDPDDA ASNGDEAPPA NMEDCIQEHA GAILQAMCRA QGLALDSTPF DECIKEFVEG LRMTLLNPDF
101: VRYALLRPKY DGEGLRKVVR GKLGDRKLKE TVTNVIVPTF DIKRNQPVVF STSKAQQDRV MNPNLSDICI AATAAPTFFP AHKFYIINLC PLNFELEEFN
201: LIDAGMFANN PTTVAMNEVW RMIDRGEHLP VEGLSPMDCS KLRILSVGTG VVNHSYTADE CNWWVSSRGC TTSATKPSRW STRSCTPPAP SSTTTSPCSS
301: SPRATRTTTC ASRRITWTLL LEPWTTPAAW RSSSRPGRTS WTGRSTGRTA RRGSTGR

Best Arabidopsis Sequence Match ( AT4G37050.1 )
(BLAST)

001: MDTERGSISS SEISRTAHLQ DRTVACLPPS YGQLVTILSI DGGGIRGIIP GTILAYLESQ LQELDGEEAR LVDYFDVISG TSTGGLIVAM LTAQDQSGGH
101: SRNSNRPLFE AKEIVPFYLK HSPKIFPQPR GIFCGWGETI VRLVGGPKFN GKYLHDLVEG FLGDTKLTQS LTNVVIPCFD IKKLQPVIFS SYQAVNNQAM
201: NAKLSDICIS TSAAPTFFPA HRFTNEDSEG IKHEFNLIDG GIAANNPTLC AIAEVTKQII KKNPVMGDIS PLDFTRFLVI SIGTGSIRNQ EKYNAKMASK
301: WGLMCWVFES GSTPILDCYS EAIHDMVDYQ SSVVFQALRS EKNYLRIDDD SLKGDLGSVD ISTEKNMEGL VEVGEALLKK RVSRVNLESG HYQPISENVT
401: NEEALKRFAK VLSEERKLRE SRSPKLKI

Arabidopsis Description

PLP3Patatin-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O23181]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.