Factsheet for HORVU6Hr1G001990.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G007000.1	Wheat	cytosol, peroxisome, plastid	85.56	85.75
TraesCS6A01G004800.1	Wheat	cytosol	85.33	85.52
TraesCS6B01G009800.1	Wheat	cytosol	82.89	83.45
HORVU1Hr1G069200.2	Barley	cytosol	38.89	43.1
HORVU1Hr1G012140.1	Barley	plastid	38.67	42.65
HORVU7Hr1G036460.1	Barley	plasma membrane	38.44	37.86
HORVU5Hr1G069130.5	Barley	cytosol	31.56	35.06
HORVU5Hr1G119820.1	Barley	plastid	30.89	35.01
HORVU2Hr1G037280.1	Barley	cytosol	20.0	34.88
HORVU5Hr1G119810.5	Barley	cytosol	29.78	34.72
HORVU4Hr1G075070.7	Barley	plastid	33.33	34.48
HORVU4Hr1G074970.1	Barley	mitochondrion	32.0	34.12
HORVU2Hr1G029000.2	Barley	cytosol	30.67	33.5
Zm00001d052923_P001	Maize	endoplasmic reticulum, extracellular	37.33	33.01
HORVU7Hr1G113030.2	Barley	plastid	19.11	32.95
HORVU7Hr1G113080.1	Barley	cytosol	32.44	31.26
HORVU7Hr1G006840.3	Barley	cytosol	20.0	31.03
HORVU4Hr1G019140.24	Barley	cytosol	14.67	30.41
HORVU4Hr1G050060.10	Barley	plastid	16.89	29.46
HORVU3Hr1G004220.4	Barley	cytosol, plastid	31.33	29.38
EES10271	Sorghum	cytosol	22.89	29.26
HORVU6Hr1G027900.2	Barley	cytosol	21.78	28.57
HORVU2Hr1G060260.1	Barley	plastid	17.33	28.36
HORVU3Hr1G101170.1	Barley	mitochondrion, plastid	12.44	27.86
HORVU2Hr1G126660.1	Barley	cytosol, nucleus	28.22	22.56
HORVU5Hr1G103060.1	Barley	mitochondrion	21.11	20.0
HORVU0Hr1G008670.3	Barley	cytosol	17.56	19.55
HORVU5Hr1G093250.4	Barley	cytosol	19.33	19.33
HORVU5Hr1G011400.6	Barley	mitochondrion	16.44	16.52
HORVU7Hr1G106600.4	Barley	cytosol	8.44	14.79
HORVU2Hr1G126570.1	Barley	extracellular	10.67	13.45

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.3	EMBL:AK371051	InterPro:Acyl_Trfase/lysoPLipase	ncoils:Coil	UniProt:F2E4H7
GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0016042	GO:GO:0016787	EnsemblPlantsGene:HORVU6Hr1G001990	EnsemblPlants:HORVU6Hr1G001990.1	InterPro:IPR002641	PFAM:PF01734
InterPro:PNPLA_dom	PFscan:PS51635	PANTHER:PTHR32176	PANTHER:PTHR32176:SF10	SUPFAM:SSF52151	UniParc:UPI0002007BFD
SEG:seg	:	:	:	:	:

Description

Patatin [Source:UniProtKB/TrEMBL;Acc:F2E4H7]

Coordinates

chrchr6H:+:5704211..5706283

Molecular Weight (calculated)

50461.2 Da

IEP (calculated)

5.484

GRAVY (calculated)

-0.404

Length

450 amino acids

Sequence
(BLAST)

001: MASNKDAELE TPLLMPEEEG PTAPLLDQGS LEPTPRPRLP PPKFGELISV LSIDGCGIHG LIPTVVLKCL EEKLQAIDGE DARIADYFDV IAGTSAGATI
101: AAMLAVPNTN KRTKYTPQEI QDFYVNNGPK IFPPKRWWRW PLDLLSASRG LKYDGTFLQK KKIKEVKDEH TFDANIIEPL IFSSFQDDAV QKLVEEAKPE
201: PPDVCIGPPS TATSTYFPAH YFDIWVSDME QSKHHLIDGG NNPTMAAISK ITREQLVKNP EFHSNGVDYM KYLVISVGAG CASVHEKGLC MKSRRTVPAK
301: WGGFNWFHSR RNSRSPVTGT FSHASAVLAD WQVRMLLHNG NHVRKQNYLY IQAQAPLFWE AILPMDNATS ENMADLLNIG DKLLAEKVAM VDLTTGKYET
401: VEDENAPTND AELRRFSELL VVERNLRLKE QQQQRQAEEE NGLHLLNILE

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.