Factsheet for Zm00001d052923_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

mitochondrion 3
endoplasmic reticulum 3
extracellular 3
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007618_P001	Maize	mitochondrion	38.7	48.4
Zm00001d007620_P001	Maize	cytosol, peroxisome, plastid	38.51	48.16
Zm00001d007604_P001	Maize	cytosol, peroxisome, plastid	38.51	48.16
Zm00001d007616_P001	Maize	cytosol, peroxisome, plastid	38.31	47.91
Zm00001d048841_P001	Maize	mitochondrion, plasma membrane	38.31	47.56
Zm00001d042041_P001	Maize	cytosol	35.36	47.49
Zm00001d007623_P002	Maize	mitochondrion	38.51	46.89
Zm00001d005911_P001	Maize	cytosol	34.97	44.28
Zm00001d031811_P001	Maize	plastid	36.94	43.12
Zm00001d031813_P001	Maize	extracellular	35.76	41.84
Zm00001d029412_P001	Maize	mitochondrion	34.58	41.12
Zm00001d031814_P001	Maize	cytosol, plasma membrane, plastid	33.79	40.86
Zm00001d031815_P001	Maize	cytosol	35.17	40.77
TraesCS6A01G004800.1	Wheat	cytosol	34.97	39.64
TraesCS6D01G007000.1	Wheat	cytosol, peroxisome, plastid	34.77	39.42
TraesCS6B01G009800.1	Wheat	cytosol	33.79	38.48
Zm00001d042504_P002	Maize	cytosol	31.04	37.53
HORVU6Hr1G001990.1	Barley	cytosol	33.01	37.33
TraesCS3B01G001300.1	Wheat	cytosol	39.29	36.97
EES10271	Sorghum	cytosol	24.16	34.94
Zm00001d028482_P001	Maize	cytosol	21.41	23.7
Zm00001d034340_P001	Maize	cytosol	19.84	23.06
Zm00001d018788_P001	Maize	nucleus	20.83	22.75
Zm00001d033254_P001	Maize	cytosol	19.06	22.61
Zm00001d041481_P001	Maize	cytosol	19.84	22.25
Zm00001d033256_P001	Maize	cytosol	19.06	21.9
Zm00001d014386_P001	Maize	cytosol, plastid	17.09	21.32
Zm00001d000203_P001	Maize	cytosol	18.47	21.12
Zm00001d031053_P001	Maize	plastid	19.65	17.89

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.3	UniProt:A0A1D6QKX3	ProteinID:AQK58361.1	InterPro:Acyl_Trfase/lysoPLipase	GO:GO:0003674
GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016042
GO:GO:0016787	InterPro:IPR002641	PFAM:PF01734	InterPro:PNPLA_dom	PFscan:PS51635	PANTHER:PTHR32176
PANTHER:PTHR32176:SF10	SUPFAM:SSF52151	SignalP:SignalP-noTM	UniParc:UPI0008430896	EnsemblPlantsGene:Zm00001d052923	EnsemblPlants:Zm00001d052923_P001
EnsemblPlants:Zm00001d052923_T001	SEG:seg	:	:	:	:

Description

Patatin-like protein 3

Coordinates

chr4:+:205035148..205037005

Molecular Weight (calculated)

57274.5 Da

IEP (calculated)

7.517

GRAVY (calculated)

-0.505

Length

509 amino acids

Sequence
(BLAST)

001: MAVRKGKLCC GLLLAGVTWK LSQASLLNFR PPCCRCWDEG PDEAELLPAS TQPSRPRARL PPPRDGQKIT VLSIDGGGIR GLIPAVILAS LEEKLKEVEK
101: EADPEGDWED ARIADYFDLI AGTSTGGLIA TMLATPRPGD ENRRPLFAAK DIRNFYYKHG ASIFSPVSKT DSLFSWLNDQ YRAFVRGGPK YDATPLEGKI
201: NRLTGTLTLA DTVTKILVPA FDVRRLNTVT FSSYDAPEML KPHKKHYLSD VCLGTTAAPT YFRPHHFWSH YTDGDRRHPF HLIDGGVGAN NPTMLAISRI
301: AREILCGKNP DFEPLEEDQA VDYSKFIVIS IGTGSTKERG RYNADDCARW TDIKWVRKDG HRPIIDMFAH ASDFWVDTHV STLLDGQRCK NYLRIQALKE
401: DGLVGPMLLL DNVCKHNMDN LIKVGENLLQ KKVTKVDMIT MRYEKQDTEM TNEEELKNFA KMLYDERKLR LGKDKQKRPR VDQNEQALPD GAMTTDTKAQ
501: ATADEMAEK

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.