Factsheet for Zm00001d028482_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95163	Sorghum	cytosol	96.09	96.09
Os03t0254400-01	Rice	cytosol	89.78	88.06
TraesCS4D01G221300.1	Wheat	cytosol	87.83	88.02
TraesCS4A01G083200.1	Wheat	cytosol	87.83	87.45
TraesCS4B01G221000.1	Wheat	cytosol	87.17	87.17
HORVU0Hr1G008670.3	Barley	cytosol	65.0	74.01
GSMUA_Achr5P18500_001	Banana	cytosol	53.04	62.89
GSMUA_Achr2P12330_001	Banana	cytosol	54.57	62.75
GSMUA_Achr5P03830_001	Banana	cytosol	59.13	62.67
GSMUA_Achr8P18860_001	Banana	cytosol	43.7	60.54
GSMUA_Achr11P...	Banana	mitochondrion	37.39	59.72
KRH34879	Soybean	cytosol	56.74	56.37
VIT_13s0019g04200.t01	Wine grape	cytosol	55.65	55.9
CDX74862	Canola	cytosol	51.96	53.23
PGSC0003DMT400060317	Potato	cytosol	53.48	52.79
Solyc05g056030.2.1	Tomato	cytosol	53.48	52.79
CDY24974	Canola	cytosol	53.48	51.68
CDX67618	Canola	mitochondrion	52.17	51.5
CDY07662	Canola	cytosol	53.04	51.26
Bra003202.1-P	Field mustard	mitochondrion	52.61	50.84
CDY07512	Canola	mitochondrion	52.39	50.74
Bra000125.1-P	Field mustard	cytosol	53.26	50.72
Bra005058.1-P	Field mustard	cytosol	53.48	50.51
AT3G54950.1	Thale cress	mitochondrion	53.04	50.0
CDY44633	Canola	cytosol	52.61	49.79
CDY56960	Canola	mitochondrion	52.39	49.59
CDX73423	Canola	mitochondrion	52.83	49.49
Bra007119.1-P	Field mustard	mitochondrion	52.83	48.99
AT2G39220.1	Thale cress	cytosol	52.83	48.7
KRG91895	Soybean	cytosol, extracellular, mitochondrion, plastid	55.87	47.24
CDY43526	Canola	nucleus	49.13	46.31
CDX68587	Canola	nucleus	50.22	46.29
Zm00001d033254_P001	Maize	cytosol	42.83	45.92
Zm00001d034340_P001	Maize	cytosol	43.04	45.21
AT4G29800.2	Thale cress	cytosol	50.43	44.11
Zm00001d000203_P001	Maize	cytosol	42.61	44.04
Zm00001d041481_P001	Maize	cytosol	43.04	43.61
Zm00001d014386_P001	Maize	cytosol, plastid	37.61	42.4
Zm00001d033256_P001	Maize	cytosol	40.0	41.53
Zm00001d018788_P001	Maize	nucleus	41.3	40.77
Zm00001d031053_P001	Maize	plastid	41.74	34.35
Zm00001d029412_P001	Maize	mitochondrion	24.78	26.64
Zm00001d005911_P001	Maize	cytosol	23.04	26.37
Zm00001d031811_P001	Maize	plastid	24.57	25.92
Zm00001d031813_P001	Maize	extracellular	24.35	25.75
Zm00001d007620_P001	Maize	cytosol, peroxisome, plastid	21.74	24.57
Zm00001d007618_P001	Maize	mitochondrion	21.74	24.57
Zm00001d007616_P001	Maize	cytosol, peroxisome, plastid	21.74	24.57
Zm00001d007604_P001	Maize	cytosol, peroxisome, plastid	21.74	24.57
Zm00001d031815_P001	Maize	cytosol	23.26	24.37
Zm00001d042504_P002	Maize	cytosol	21.96	23.99
Zm00001d007623_P002	Maize	mitochondrion	21.74	23.92
Zm00001d048841_P001	Maize	mitochondrion, plasma membrane	21.3	23.9
Zm00001d031814_P001	Maize	cytosol, plasma membrane, plastid	21.3	23.28
Zm00001d042041_P001	Maize	cytosol	18.91	22.96
Zm00001d052923_P001	Maize	endoplasmic reticulum, extracellular	23.7	21.41

Protein Annotations

EntrezGene:100284065	Gene3D:3.40.1090.10	MapMan:5.7.2.2.4	UniProt:A0A1D6JWQ9	InterPro:Acyl_Trfase/lysoPLipase	GO:GO:0003674
GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016042
GO:GO:0016787	InterPro:IPR002641	ProteinID:ONL96176.1	PFAM:PF01734	InterPro:PNPLA_dom	PFscan:PS51635
PANTHER:PTHR32241	SUPFAM:SSF52151	UniParc:UPI00022212E1	EnsemblPlantsGene:Zm00001d028482	EnsemblPlants:Zm00001d028482_P001	EnsemblPlants:Zm00001d028482_T001
SEG:seg	:	:	:	:	:

Description

Patatin-like protein 3

Coordinates

chr1:-:36508912..36510926

Molecular Weight (calculated)

48947.0 Da

IEP (calculated)

6.733

GRAVY (calculated)

-0.207

Length

460 amino acids

Sequence
(BLAST)

001: MDEAEEMQVE RLHEEADAGG ADTDKLSYEI FSILESKFLF GYTDPHQLWL PKPAAELPAQ ASAAAPGKAA QRGKVCVLCV DGGGGGLRAL LPGRALAHLE
101: AALRRASGDP DARVADYFDL AAGTGAGGVF AAMLFSTHSR GAPLFHADDT WRLVADHAPR MFRRPAASSS TSLFCRGKKR PLAAPTAALE AAMKAAFGQE
201: LTLRDTIKPV LISCYDLKTS APLVFSRADA LENGSYDFRL CEVGRAAWSE AGRFEPAEVA SVDGATSCAA VDGGPTMGSP AAAAITHVLH NKHEFPFVRG
301: VEDLLVLSIG GCSGGGSGAA GEAELRRMRR WGPKEWARPI ARIAADGAAD LVDHAVARAF GQCRASNYLR IQAKRESMPP CGPDGEYDPT PGNVRALLAA
401: ADEMLKQRNV ESVLFEGRRV GEQTNAEKLD WFAAELVAEH RSRASRIAPT VAFKQAPQKP

Best Arabidopsis Sequence Match ( AT3G54950.1 )
(BLAST)

001: MHRVRNKPVK STATASVKHL IKQRGGDGAT AASKSANDYN NNDSLLTDMQ EPSIDTDKLS YEIFSILESK FLFGYDDSKP EPANSVVAGS IKNQRGKICI
101: LSIDGGGMRG ILPGKALAYL EHALKSKSGD PNARIADYFD VAAGSGIGGI YTAMLFGSRD GNRPIFKADD TWQFLTRNAK GLYGGAGILK RVLRTGSGCC
201: SGTAKLKKVM KESFSELTLK DTLKPVLIPC YDLKSSGPFL FSRADALETD GYDFRLSEVC RATWAEPGVF EPVEMKSVDG QTKCVAVGGG LAMSNPTAAA
301: ITHVLHNKQE FPFVRGVEDL LVLSLGMGQL LDVSYEYDRI IKWKAKHWAR PAALISNDGA ADTVDQAVAM AFGHCRSSNY VRIQANGSNL GPWSPNMDTD
401: PSGSNVNMLM GVAEEMLKQK NVESVLFGGK RIDEQSNFEK LDWLAGELVL EHQRRNSRIA PTVAFKQSVH RADQKTSDKD IGVTARER

Arabidopsis Description

PLP7Patatin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV43]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.