Factsheet for Zm00001d014386_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G464400.1	Wheat	cytosol	86.52	86.31
TraesCS7B01G364900.1	Wheat	cytosol	85.29	85.93
TraesCS7D01G452000.1	Wheat	cytosol	85.54	83.29
EER90215	Sorghum	plastid	94.36	81.74
HORVU7Hr1G106600.4	Barley	cytosol	48.28	76.65
Os06t0677000-00	Rice	plastid	83.82	71.1
KRH36757	Soybean	cytosol	48.77	45.85
KRH11757	Soybean	cytosol	48.53	45.83
Zm00001d033254_P001	Maize	cytosol	48.04	45.69
VIT_10s0092g00150.t01	Wine grape	cytosol	47.06	44.96
Zm00001d000203_P001	Maize	cytosol	48.04	44.04
Zm00001d033256_P001	Maize	cytosol	47.55	43.79
Zm00001d034340_P001	Maize	cytosol	46.81	43.61
PGSC0003DMT400021555	Potato	cytosol	46.08	43.22
Solyc10g080690.1.1	Tomato	cytosol	45.34	42.82
Zm00001d041481_P001	Maize	cytosol	47.55	42.73
Solyc10g078530.1.1	Tomato	cytosol	45.34	42.53
PGSC0003DMT400060932	Potato	cytosol	44.61	42.42
Zm00001d018788_P001	Maize	nucleus	47.06	41.2
Zm00001d028482_P001	Maize	cytosol	42.4	37.61
Zm00001d031053_P001	Maize	plastid	45.34	33.09
Zm00001d005911_P001	Maize	cytosol	23.77	24.13
Zm00001d031811_P001	Maize	plastid	25.0	23.39
Zm00001d031813_P001	Maize	extracellular	24.26	22.76
Zm00001d029412_P001	Maize	mitochondrion	22.55	21.5
Zm00001d031815_P001	Maize	cytosol	22.3	20.73
Zm00001d042504_P002	Maize	cytosol	21.32	20.67
Zm00001d031814_P001	Maize	cytosol, plasma membrane, plastid	20.83	20.19
Zm00001d048841_P001	Maize	mitochondrion, plasma membrane	20.1	20.0
Zm00001d007620_P001	Maize	cytosol, peroxisome, plastid	19.61	19.66
Zm00001d007604_P001	Maize	cytosol, peroxisome, plastid	19.61	19.66
Zm00001d007618_P001	Maize	mitochondrion	19.36	19.41
Zm00001d007616_P001	Maize	cytosol, peroxisome, plastid	19.36	19.41
Zm00001d007623_P002	Maize	mitochondrion	19.61	19.14
Zm00001d042041_P001	Maize	cytosol	16.67	17.94
Zm00001d052923_P001	Maize	endoplasmic reticulum, extracellular	21.32	17.09

Protein Annotations

EMBL:BT043146	EnsemblPlants:Zm00001d014386_P001	EnsemblPlants:Zm00001d014386_T001	EnsemblPlantsGene:Zm00001d014386	EntrezGene:100274476	Gene3D:3.40.1090.10
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	InterPro:Acyl_Trfase/lysoPLipase	InterPro:IPR002641	InterPro:PNPLA_dom
PANTHER:PTHR32241	PANTHER:PTHR32241:SF7	PFscan:PS51635	ProteinID:AQK66098.1	SEG:seg	SUPFAM:SSF52151
UniParc:UPI00017B813A	UniProt:B4G1A8	MapMan:35.1	:	:	:

Description

Patatin-like protein 6

Coordinates

chr5:+:44141573..44143424

Molecular Weight (calculated)

41804.9 Da

IEP (calculated)

8.379

GRAVY (calculated)

0.146

Length

408 amino acids

Sequence
(BLAST)

001: MATASLALLD QTLLPSPLAY NGGSDRLSQE IFSILESNFL FGASPLEGGA CSAGRVRVLS IDGGADGGAL AAAALVRLER RLQELSGNPA ARVADFFDLA
101: AGSGAGGFLA AALFACRMPA EAARDVVAKN RKVLSGRGGG LMSFRRPEAA FRKVFGDLTV RDAAKPLLIP CYDMATAAPF VFSRADAVEA DAFDFPLWQV
201: CAAACGVGPA EVASLDGRTR LRAASGAGAG GGGASAAVAN PTAVALTHVL HNKREFPFAA GAGDLVVLSL GGRAAASLGR LSSSSLLRIA GACQADMVDQ
301: AVSMVFGESR ATNYVRIQGN GIAPGETAEA ALAERGVESV LFRGKKLMAQ TNGERLDGVA EQLVREHHRR LESKTPVVLV KPSATPRTSS SSASTLITVS
401: TNSSSESP

Best Arabidopsis Sequence Match ( AT2G39220.1 )
(BLAST)

001: MLTTMQRVHN KPIDSIGGFK HLVKQSNGGD GGVTATDMQE PSIETDKLSY EIFSILESKF LFGYDDDLKL MESRSRDPSP EQETASPAMV EALNGVVPGT
101: VKNQRGKVCV LSIDSGGMRG IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED TWRFLAMKGK SFYNKSPPGI
201: LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301: DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG
401: SSFGPCKPNI DTDASPSNVN MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SGDRRVDQQT IFKDIDCMF

Arabidopsis Description

PLP6Patatin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O80959]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.