Factsheet for Zm00001d031053_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d041481_P001	Maize	cytosol	67.44	83.04
OQU79585	Sorghum	cytosol	67.62	78.1
TraesCS5D01G057600.1	Wheat	cytosol, peroxisome, plastid	62.25	72.5
TraesCS5B01G052000.1	Wheat	cytosol, peroxisome, plastid	62.25	71.9
TraesCS5A01G047000.1	Wheat	cytosol, peroxisome, plastid	61.9	71.64
Zm00001d033254_P001	Maize	cytosol	51.7	67.37
HORVU5Hr1G011400.6	Barley	mitochondrion	52.95	66.07
Zm00001d000203_P001	Maize	cytosol	51.34	64.49
Zm00001d033256_P001	Maize	cytosol	50.8	64.11
Os12t0611300-00	Rice	cytosol, peroxisome, plastid	51.52	55.17
GSMUA_Achr11P...	Banana	cytosol	27.01	53.93
Zm00001d034340_P001	Maize	cytosol	40.97	52.28
GSMUA_Achr8P07160_001	Banana	cytosol	34.7	51.32
GSMUA_Achr5P26630_001	Banana	cytosol	29.7	48.12
GSMUA_Achr2P01360_001	Banana	cytosol	34.17	47.87
Zm00001d018788_P001	Maize	nucleus	38.1	45.71
Zm00001d014386_P001	Maize	cytosol, plastid	33.09	45.34
KRH11757	Soybean	cytosol	34.7	44.91
KRH36757	Soybean	cytosol	34.53	44.47
VIT_10s0092g00150.t01	Wine grape	cytosol	32.92	43.09
PGSC0003DMT400021555	Potato	cytosol	33.45	42.99
Solyc10g078530.1.1	Tomato	cytosol	33.27	42.76
Solyc10g080690.1.1	Tomato	cytosol	32.38	41.9
Zm00001d028482_P001	Maize	cytosol	34.35	41.74
PGSC0003DMT400060932	Potato	cytosol	32.02	41.72
Zm00001d005911_P001	Maize	cytosol	17.53	24.38
Zm00001d029412_P001	Maize	mitochondrion	18.43	24.07
Zm00001d031811_P001	Maize	plastid	18.25	23.39
Zm00001d031815_P001	Maize	cytosol	17.89	22.78
Zm00001d031813_P001	Maize	extracellular	17.53	22.53
Zm00001d042504_P002	Maize	cytosol	16.28	21.62
Zm00001d007616_P001	Maize	cytosol, peroxisome, plastid	15.21	20.88
Zm00001d007620_P001	Maize	cytosol, peroxisome, plastid	15.21	20.88
Zm00001d007618_P001	Maize	mitochondrion	15.21	20.88
Zm00001d007604_P001	Maize	cytosol, peroxisome, plastid	15.21	20.88
Zm00001d048841_P001	Maize	mitochondrion, plasma membrane	15.21	20.73
Zm00001d031814_P001	Maize	cytosol, plasma membrane, plastid	15.56	20.67
Zm00001d042041_P001	Maize	cytosol	13.95	20.58
Zm00001d007623_P002	Maize	mitochondrion	15.21	20.33
Zm00001d052923_P001	Maize	endoplasmic reticulum, extracellular	17.89	19.65

Protein Annotations

EnsemblPlants:Zm00001d031053_P001	EnsemblPlants:Zm00001d031053_T001	EnsemblPlantsGene:Zm00001d031053	Gene3D:3.40.1090.10	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	InterPro:Acyl_Trfase/lysoPLipase	InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32241	PANTHER:PTHR32241:SF4
PFscan:PS51635	ProteinID:ONM02061.1	SEG:seg	SUPFAM:SSF52151	UniParc:UPI00097CDA2B	UniProt:A0A1R3M0K8
MapMan:5.7.2.2.4	:	:	:	:	:

Description

Patatin-like protein 6

Coordinates

chr1:-:174882516..174885087

Molecular Weight (calculated)

57189.9 Da

IEP (calculated)

10.557

GRAVY (calculated)

0.064

Length

559 amino acids

Sequence
(BLAST)

001: MSSGAITASP ISPSPPQPTA RHSPTPVPPP IIREPRQAPA AAAAMASSPP DVDLGKLSYE IFSLLESKFL FGGGSVPGTP ARAAAPGPGE DRGRVRVLAI
101: DGCGPGPGDA LLAAAALARL EAALRARAGD PGARVADFFD AAAGAGAGGV LAAMLFVRGD DGRARYTAAD ALAFVAASLG RGGGWGSGGG GGVRGKWAAL
201: FRRGGRRGAP SPPLRRVFGD ATLRDTVAPL LVPCYDLATA APFLFSRADA VGSGSLDFRL RDVCAATCAA AGGAAPAVRS VDGRTAIAAA SGGVAAMGNP
301: AAAAITHVLH NKREFPLAAG VDDLLVVSIG SGSSFASAAA ASAPSTGWRT PVPPRSPSPA EMVRLTSEGV ADMVDQAVAM AFGHTCGRNY VRIQASCVGT
401: ALRSLDAKKA VALADGMLAQ RNVEAELFRG RRLSAKSNRE KLDAFAAELV KEQERRDRHR AVPGIAGLVP ALAPAIGDRV DPRTSWSKAG KERLEGCVKR
501: MAVPGWSFRV SVCVAYRTLQ VQARLLRGCV VCKGKGKQRT QISTLTICLE ICKLIACSN

Best Arabidopsis Sequence Match ( AT2G39220.1 )
(BLAST)

001: MLTTMQRVHN KPIDSIGGFK HLVKQSNGGD GGVTATDMQE PSIETDKLSY EIFSILESKF LFGYDDDLKL MESRSRDPSP EQETASPAMV EALNGVVPGT
101: VKNQRGKVCV LSIDSGGMRG IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED TWRFLAMKGK SFYNKSPPGI
201: LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301: DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG
401: SSFGPCKPNI DTDASPSNVN MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SGDRRVDQQT IFKDIDCMF

Arabidopsis Description

PLP6Patatin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O80959]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.