Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- vacuole 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH11757 | Soybean | cytosol | 66.28 | 65.51 |
| KRH36757 | Soybean | cytosol | 66.04 | 64.98 |
| PGSC0003DMT400060932 | Potato | cytosol | 64.87 | 64.57 |
| Solyc10g080690.1.1 | Tomato | cytosol | 65.11 | 64.35 |
| Solyc10g078530.1.1 | Tomato | cytosol | 61.83 | 60.69 |
| PGSC0003DMT400021555 | Potato | cytosol | 61.59 | 60.46 |
| GSMUA_Achr8P07160_001 | Banana | cytosol | 48.48 | 54.76 |
| TraesCS5B01G424100.1 | Wheat | cytosol | 49.65 | 53.94 |
| TraesCS5D01G430400.1 | Wheat | cytosol | 49.41 | 53.69 |
| TraesCS5A01G422200.1 | Wheat | cytosol | 49.18 | 52.63 |
| GSMUA_Achr5P02370_001 | Banana | cytosol | 47.07 | 51.15 |
| GSMUA_Achr11P... | Banana | cytosol | 33.02 | 50.36 |
| GSMUA_AchrUn_... | Banana | cytosol | 41.92 | 49.58 |
| TraesCS5B01G423900.1 | Wheat | cytosol | 51.05 | 49.1 |
| TraesCS5A01G422000.1 | Wheat | cytosol | 50.59 | 48.98 |
| GSMUA_Achr5P26630_001 | Banana | cytosol | 39.34 | 48.7 |
| GSMUA_Achr2P01360_001 | Banana | cytosol | 44.96 | 48.12 |
| TraesCS7B01G364900.1 | Wheat | cytosol | 45.43 | 47.9 |
| TraesCS7A01G464400.1 | Wheat | cytosol | 45.67 | 47.68 |
| VIT_13s0019g04200.t01 | Wine grape | cytosol | 50.82 | 47.38 |
| Zm00001d014386_P001 | Maize | cytosol, plastid | 44.96 | 47.06 |
| EER90785 | Sorghum | cytosol | 49.41 | 46.99 |
| Zm00001d034340_P001 | Maize | cytosol | 48.01 | 46.8 |
| TraesCS7D01G452000.1 | Wheat | cytosol | 44.96 | 45.82 |
| Os03t0784100-00 | Rice | cytosol | 49.88 | 45.32 |
| Zm00001d033254_P001 | Maize | cytosol | 45.43 | 45.22 |
| TraesCS5D01G430300.1 | Wheat | plastid | 50.59 | 45.0 |
| TraesCSU01G072800.1 | Wheat | cytosol | 46.37 | 45.0 |
| TraesCS5D01G385900.1 | Wheat | cytosol | 46.6 | 44.92 |
| Os03t0640000-00 | Rice | cytosol | 46.37 | 44.9 |
| HORVU5Hr1G103060.1 | Barley | mitochondrion | 49.88 | 44.84 |
| HORVU5Hr1G093250.4 | Barley | cytosol | 46.37 | 44.0 |
| Zm00001d018788_P001 | Maize | nucleus | 47.78 | 43.78 |
| OQU91280 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 44.03 | 43.32 |
| Zm00001d041481_P001 | Maize | cytosol | 45.67 | 42.95 |
| EER93762 | Sorghum | plastid | 44.73 | 42.92 |
| HORVU7Hr1G106600.4 | Barley | cytosol | 25.76 | 42.8 |
| Zm00001d033256_P001 | Maize | cytosol | 44.03 | 42.44 |
| Zm00001d000203_P001 | Maize | cytosol | 44.03 | 42.25 |
| EER91181 | Sorghum | plastid | 45.43 | 42.08 |
| GSMUA_Achr6P31310_001 | Banana | cytosol | 45.9 | 41.7 |
| VIT_07s0151g01130.t01 | Wine grape | cytosol | 37.47 | 41.56 |
| TraesCS5D01G057600.1 | Wheat | cytosol, peroxisome, plastid | 46.6 | 41.46 |
| OQU79585 | Sorghum | cytosol | 46.6 | 41.12 |
| EER97967 | Sorghum | nucleus | 47.31 | 41.06 |
| TraesCS5A01G047000.1 | Wheat | cytosol, peroxisome, plastid | 46.37 | 40.99 |
| TraesCS5B01G052000.1 | Wheat | cytosol, peroxisome, plastid | 46.37 | 40.91 |
| TraesCS5B01G379300.1 | Wheat | plastid | 46.37 | 40.82 |
| EER90215 | Sorghum | plastid | 44.73 | 40.55 |
| HORVU5Hr1G011400.6 | Barley | mitochondrion | 41.45 | 39.51 |
| Os06t0677000-00 | Rice | plastid | 43.79 | 38.88 |
| Zm00001d031053_P001 | Maize | plastid | 43.09 | 32.92 |
| GSMUA_AchrUn_... | Banana | plastid | 33.72 | 32.73 |
| Os07t0144500-00 | Rice | mitochondrion, plastid | 30.21 | 31.01 |
| GSMUA_Achr4P31750_001 | Banana | cytosol | 49.41 | 30.94 |
| Os12t0611300-00 | Rice | cytosol, peroxisome, plastid | 36.53 | 29.89 |
| VIT_00s0567g00050.t01 | Wine grape | cytosol | 14.52 | 29.11 |
| VIT_18s0001g10940.t01 | Wine grape | cytosol, peroxisome, plastid | 26.46 | 27.83 |
| VIT_18s0001g10950.t01 | Wine grape | cytosol, peroxisome, plastid | 26.46 | 27.83 |
| VIT_18s0001g10970.t01 | Wine grape | cytosol, peroxisome, plastid | 26.23 | 27.59 |
| VIT_18s0001g11010.t01 | Wine grape | cytosol | 26.23 | 27.59 |
| VIT_00s0567g00060.t01 | Wine grape | cytosol | 24.12 | 27.54 |
| VIT_18s0001g10980.t01 | Wine grape | cytosol, peroxisome, plastid | 25.06 | 27.37 |
| VIT_18s0001g10900.t01 | Wine grape | cytosol | 12.88 | 27.36 |
| VIT_18s0001g10880.t01 | Wine grape | cytosol | 25.29 | 26.6 |
| VIT_07s0005g01880.t01 | Wine grape | plastid | 23.65 | 26.58 |
| VIT_18s0001g10930.t01 | Wine grape | cytosol | 19.2 | 26.2 |
| VIT_18s0001g10850.t01 | Wine grape | cytosol | 25.29 | 26.15 |
| VIT_00s0567g00040.t01 | Wine grape | cytosol | 9.84 | 25.93 |
| VIT_07s0031g00850.t01 | Wine grape | cytosol, peroxisome, plastid | 24.12 | 25.62 |
| VIT_07s0031g00870.t01 | Wine grape | cytosol | 24.36 | 25.55 |
| VIT_18s0001g10910.t01 | Wine grape | cytosol | 24.59 | 25.42 |
| VIT_18s0001g10870.t01 | Wine grape | cytosol | 24.59 | 25.42 |
| VIT_07s0031g00860.t01 | Wine grape | cytosol | 24.12 | 25.25 |
| VIT_18s0001g10920.t01 | Wine grape | extracellular | 25.06 | 24.54 |
| VIT_18s0001g10830.t01 | Wine grape | mitochondrion, plasma membrane, plastid | 25.06 | 23.26 |
| VIT_07s0005g01860.t01 | Wine grape | cytosol | 20.14 | 22.63 |
| VIT_07s0005g01890.t01 | Wine grape | mitochondrion | 19.91 | 22.31 |
| VIT_07s0005g01840.t01 | Wine grape | cytosol, mitochondrion, plastid | 21.55 | 21.7 |
Protein Annotations
| EntrezGene:100252820 | wikigene:100252820 | Gene3D:3.40.1090.10 | MapMan:5.7.2.2.4 | InterPro:Acyl_Trfase/lysoPLipase | ProteinID:CCB61487 |
| ProteinID:CCB61487.1 | UniProt:F6I3G9 | EMBL:FN596741 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0016042 | GO:GO:0016787 | InterPro:IPR002641 |
| EntrezGene:LOC100252820 | wikigene:LOC100252820 | PFAM:PF01734 | InterPro:PNPLA_dom | PFscan:PS51635 | PANTHER:PTHR32241 |
| PANTHER:PTHR32241:SF6 | SUPFAM:SSF52151 | TIGR:TC55615 | UniParc:UPI00015CBCAA | ArrayExpress:VIT_10s0092g00150 | EnsemblPlantsGene:VIT_10s0092g00150 |
| EnsemblPlants:VIT_10s0092g00150.t01 | unigene:Vvi.15967 | unigene:Vvi.17601 | RefSeq:XP_002276337 | RefSeq:XP_002276337.1 | SEG:seg |
Description
Patatin [Source:UniProtKB/TrEMBL;Acc:F6I3G9]
Coordinates
chr10:+:11360141..11362256
Molecular Weight (calculated)
45933.9 Da
IEP (calculated)
8.598
GRAVY (calculated)
-0.167
Length
427 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAISTSPMI DSSLDPSFDV DKLTCEIFSI LENKFLFGYD DSKLLQNQTP NKPLAGKVAI LSIDGGGATD GILAARSLAH LEASLRHKSG NPNARISDYF
101: DVVAGSGAGG ILAALLFTRG KDGGPLFSAD EALRFLVENR RRIFRAPPAG VLRRMFRPAK AEKVFQRAFG EATLKDTLKS VLITCYDLST RAPFLFSRAD
201: ALEIDGYDFK MKDVCVATSS DPTVAGGVEL RSVDRGTRIM AVDGRIAMNN PTAAAITHVL NNKQEFPFCN SVGDLLVVSL GNGESDSGAG NLSSTASELV
301: RIAGEGASDM VDQAVSMAFG ESRATNYVRI QGNAMLGKRH SNGLKDSKQL VGMTEEMLEQ KNVESVLFSG KKLVEKTNSE KLQWFAAEIM KEKERRKTSI
401: LPTVVLKQAS HSPRTSSATT LSSMSSN
101: DVVAGSGAGG ILAALLFTRG KDGGPLFSAD EALRFLVENR RRIFRAPPAG VLRRMFRPAK AEKVFQRAFG EATLKDTLKS VLITCYDLST RAPFLFSRAD
201: ALEIDGYDFK MKDVCVATSS DPTVAGGVEL RSVDRGTRIM AVDGRIAMNN PTAAAITHVL NNKQEFPFCN SVGDLLVVSL GNGESDSGAG NLSSTASELV
301: RIAGEGASDM VDQAVSMAFG ESRATNYVRI QGNAMLGKRH SNGLKDSKQL VGMTEEMLEQ KNVESVLFSG KKLVEKTNSE KLQWFAAEIM KEKERRKTSI
401: LPTVVLKQAS HSPRTSSATT LSSMSSN
001: MHRVRNKPVK STATASVKHL IKQRGGDGAT AASKSANDYN NNDSLLTDMQ EPSIDTDKLS YEIFSILESK FLFGYDDSKP EPANSVVAGS IKNQRGKICI
101: LSIDGGGMRG ILPGKALAYL EHALKSKSGD PNARIADYFD VAAGSGIGGI YTAMLFGSRD GNRPIFKADD TWQFLTRNAK GLYGGAGILK RVLRTGSGCC
201: SGTAKLKKVM KESFSELTLK DTLKPVLIPC YDLKSSGPFL FSRADALETD GYDFRLSEVC RATWAEPGVF EPVEMKSVDG QTKCVAVGGG LAMSNPTAAA
301: ITHVLHNKQE FPFVRGVEDL LVLSLGMGQL LDVSYEYDRI IKWKAKHWAR PAALISNDGA ADTVDQAVAM AFGHCRSSNY VRIQANGSNL GPWSPNMDTD
401: PSGSNVNMLM GVAEEMLKQK NVESVLFGGK RIDEQSNFEK LDWLAGELVL EHQRRNSRIA PTVAFKQSVH RADQKTSDKD IGVTARER
101: LSIDGGGMRG ILPGKALAYL EHALKSKSGD PNARIADYFD VAAGSGIGGI YTAMLFGSRD GNRPIFKADD TWQFLTRNAK GLYGGAGILK RVLRTGSGCC
201: SGTAKLKKVM KESFSELTLK DTLKPVLIPC YDLKSSGPFL FSRADALETD GYDFRLSEVC RATWAEPGVF EPVEMKSVDG QTKCVAVGGG LAMSNPTAAA
301: ITHVLHNKQE FPFVRGVEDL LVLSLGMGQL LDVSYEYDRI IKWKAKHWAR PAALISNDGA ADTVDQAVAM AFGHCRSSNY VRIQANGSNL GPWSPNMDTD
401: PSGSNVNMLM GVAEEMLKQK NVESVLFGGK RIDEQSNFEK LDWLAGELVL EHQRRNSRIA PTVAFKQSVH RADQKTSDKD IGVTARER
Arabidopsis Description
PLP7Patatin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV43]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.