CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d041481_P001	Maize	cytosol	87.4	93.17
TraesCS5D01G057600.1	Wheat	cytosol, peroxisome, plastid	80.17	80.83
TraesCS5B01G052000.1	Wheat	cytosol, peroxisome, plastid	80.58	80.58
TraesCS5A01G047000.1	Wheat	cytosol, peroxisome, plastid	79.96	80.12
HORVU5Hr1G011400.6	Barley	mitochondrion	69.42	75.0
EER93762	Sorghum	plastid	64.88	70.56
EER91181	Sorghum	plastid	66.94	70.28
OQU91280	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	63.02	70.28
Zm00001d031053_P001	Maize	plastid	78.1	67.62
Os12t0611300-00	Rice	cytosol, peroxisome, plastid	60.95	56.51
GSMUA_Achr8P07160_001	Banana	cytosol	42.98	55.03
GSMUA_Achr11P...	Banana	cytosol	31.2	53.93
EER90785	Sorghum	cytosol	47.93	51.67
GSMUA_Achr5P26630_001	Banana	cytosol	36.36	51.01
GSMUA_Achr2P01360_001	Banana	cytosol	41.74	50.63
KRH36757	Soybean	cytosol	43.18	48.16
KRH11757	Soybean	cytosol	42.77	47.92
VIT_10s0092g00150.t01	Wine grape	cytosol	41.12	46.6
PGSC0003DMT400021555	Potato	cytosol	41.53	46.21
Solyc10g078530.1.1	Tomato	cytosol	41.12	45.75
EER97967	Sorghum	nucleus	46.07	45.33
PGSC0003DMT400060932	Potato	cytosol	39.88	44.99
Solyc10g080690.1.1	Tomato	cytosol	39.88	44.68
EER95163	Sorghum	cytosol	41.32	43.48
EER90215	Sorghum	plastid	39.88	40.98
OQU84037	Sorghum	cytosol, extracellular, plastid	7.85	39.18
OQU80645	Sorghum	cytosol	20.25	24.44
KXG25325	Sorghum	plastid	21.28	23.57
EER94748	Sorghum	mitochondrion	21.28	23.57
KXG35787	Sorghum	cytosol	19.01	23.41
EER99713	Sorghum	cytosol	18.8	22.58
OQU88041	Sorghum	cytosol	19.01	22.28
EES15134	Sorghum	plastid	19.83	22.07
EES08840	Sorghum	cytosol	18.18	21.73
EES10106	Sorghum	plastid	18.39	21.71
EES08841	Sorghum	cytosol	18.18	21.31
EES10271	Sorghum	cytosol	14.05	19.32
OQU80643	Sorghum	cytosol	19.42	19.11
OQU83677	Sorghum	cytosol	9.71	14.11

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.4	UniProt:A0A1Z5R810	InterPro:Acyl_Trfase/lysoPLipase	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016042	GO:GO:0016787
InterPro:IPR002641	EnsemblPlants:OQU79585	ProteinID:OQU79585	ProteinID:OQU79585.1	PFAM:PF01734	InterPro:PNPLA_dom
PFscan:PS51635	PANTHER:PTHR32241	PANTHER:PTHR32241:SF4	EnsemblPlantsGene:SORBI_3008G166050	SUPFAM:SSF52151	UniParc:UPI000B423E31
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:59960313..59963155

Molecular Weight (calculated)

49250.1 Da

IEP (calculated)

9.520

GRAVY (calculated)

-0.071

Length

484 amino acids

Sequence
(BLAST)

001: MASPPPDVDL GKLSYEIFSL LESKFLFGGT PGVGSVPGTP GRAPGEDNRD RDRGRVRVLA IDGCGPGPGD ALLAAAALAR LEAALRARAG DPDARVADFF
101: DAAAGAGAGG VLAAMLFLKG DDGRARYTAA DALAFVAASL GRPGGGWGGG GSGAGAGAGV GERLRSRWAA LFRRGERSSR SSSSAPLRRV FGDATLRDTV
201: APLLVPCYDL ATAAPFLFSR ADAVESDSFD FRLRDVCAAT CAAGSAAVAV RSVDGRTAIA AASGGVAAMG NPTAAAITHV LHNKHEFPLA AGVDDLLVVS
301: IGSGSSAGTA ATATPSAGGW RTPIPPRSPS PAEMVRLTAE GVADMVDQAV AMAFGHTCGR NYVRIQAACS GKALRSLDAK KAVAAADGML TQRNVEAELF
401: RGRRLSEKSN REKLDAFAAE LVKEQERRAR SPGLLPTVVI KQSPATATAT PRPSSATTAS SATAATGRTT STMPSPASQD SYQQ

Best Arabidopsis Sequence Match ( AT2G39220.1 )
(BLAST)

001: MLTTMQRVHN KPIDSIGGFK HLVKQSNGGD GGVTATDMQE PSIETDKLSY EIFSILESKF LFGYDDDLKL MESRSRDPSP EQETASPAMV EALNGVVPGT
101: VKNQRGKVCV LSIDSGGMRG IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED TWRFLAMKGK SFYNKSPPGI
201: LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301: DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG
401: SSFGPCKPNI DTDASPSNVN MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SGDRRVDQQT IFKDIDCMF

Arabidopsis Description

PLP6Patatin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O80959]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.