CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
vacuole 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034340_P001	Maize	cytosol	86.41	88.58
TraesCS5D01G430400.1	Wheat	cytosol	67.71	77.35
TraesCS5B01G424100.1	Wheat	cytosol	67.48	77.1
TraesCS5A01G422200.1	Wheat	cytosol	67.48	75.94
TraesCS5A01G422000.1	Wheat	cytosol	72.61	73.92
TraesCS5B01G423900.1	Wheat	cytosol	72.83	73.65
Os03t0784100-00	Rice	cytosol	73.27	70.0
HORVU5Hr1G103060.1	Barley	mitochondrion	72.38	68.42
TraesCS5D01G430300.1	Wheat	plastid	72.38	67.71
GSMUA_Achr8P07160_001	Banana	cytosol	49.0	58.2
GSMUA_Achr11P...	Banana	cytosol	35.41	56.79
GSMUA_Achr2P01360_001	Banana	cytosol	46.77	52.63
GSMUA_Achr5P26630_001	Banana	cytosol	40.09	52.17
EER97967	Sorghum	nucleus	57.02	52.03
OQU91280	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	49.67	51.38
EER91181	Sorghum	plastid	52.56	51.19
EER93762	Sorghum	plastid	50.33	50.79
KRH11757	Soybean	cytosol	48.11	50.0
VIT_10s0092g00150.t01	Wine grape	cytosol	46.99	49.41
KRH36757	Soybean	cytosol	47.44	49.08
OQU79585	Sorghum	cytosol	51.67	47.93
Solyc10g080690.1.1	Tomato	cytosol	46.1	47.92
PGSC0003DMT400060932	Potato	cytosol	45.43	47.55
PGSC0003DMT400021555	Potato	cytosol	45.88	47.36
Solyc10g078530.1.1	Tomato	cytosol	45.43	46.9
EER95163	Sorghum	cytosol	46.33	45.22
EER90215	Sorghum	plastid	42.76	40.76
OQU84037	Sorghum	cytosol, extracellular, plastid	8.24	38.14
OQU80645	Sorghum	cytosol	23.83	26.68
KXG35787	Sorghum	cytosol	23.16	26.46
EER99713	Sorghum	cytosol	22.72	25.31
KXG25325	Sorghum	plastid	24.5	25.17
OQU88041	Sorghum	cytosol	22.49	24.46
EES10106	Sorghum	plastid	22.27	24.39
EES08840	Sorghum	cytosol	21.6	23.95
EES15134	Sorghum	plastid	23.16	23.91
EES08841	Sorghum	cytosol	21.83	23.73
EER94748	Sorghum	mitochondrion	22.49	23.11
OQU80643	Sorghum	cytosol	24.28	22.15
EES10271	Sorghum	cytosol	16.26	20.74
OQU83677	Sorghum	cytosol	10.91	14.71

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.4	EntrezGene:8083926	InterPro:Acyl_Trfase/lysoPLipase	UniProt:C5WY87	EnsemblPlants:EER90785
ProteinID:EER90785	ProteinID:EER90785.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0016042	GO:GO:0016787	InterPro:IPR002641	PFAM:PF01734
InterPro:PNPLA_dom	PFscan:PS51635	PANTHER:PTHR32241	PANTHER:PTHR32241:SF6	EnsemblPlantsGene:SORBI_3001G067500	SUPFAM:SSF52151
UniParc:UPI0001A82206	RefSeq:XP_002463787.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:5108083..5109967

Molecular Weight (calculated)

46625.3 Da

IEP (calculated)

9.648

GRAVY (calculated)

-0.080

Length

449 amino acids

Sequence
(BLAST)

001: METARAVDSG AGLDVDKLTY EIFSILESKF LFGYDDPKLF APASAGASPL PSPGAAAASS GKATPTRAGT KTKTKVCILS IDGGGRAADG LLAGAALVRL
101: EASLRRRTGD DGARLADFFD VAAGSGAGGV LAAMLVARGA DGRPRFSADD ALAFLLRSLR RGGGAWSSDA QGLRGLFQFR RPGGGGGAGA FRRVFGDLTL
201: RDTVRPVLVP CYDLATAAPF LFSRADAVET RAYDFRLRDV CAATCAGSGT VEARSCDGST RIAAVGGGVA LGNPTAAAIT HVLNNRRDFP LVAGVEDLLV
301: VSIGSGEADS KERERGAAST SQIVRIAAEG VADMVDQAVA MAFGQNRTTN YIRIQATGTP SPRGASRGAA AAEAEEMLAQ RNVESVLFRG KKVAEQTNAE
401: KLERFAHELV KERDRRRASP AAPALVRHHQ PSAAPSYSSL VSHTLASIM

Best Arabidopsis Sequence Match ( AT3G54950.1 )
(BLAST)

001: MHRVRNKPVK STATASVKHL IKQRGGDGAT AASKSANDYN NNDSLLTDMQ EPSIDTDKLS YEIFSILESK FLFGYDDSKP EPANSVVAGS IKNQRGKICI
101: LSIDGGGMRG ILPGKALAYL EHALKSKSGD PNARIADYFD VAAGSGIGGI YTAMLFGSRD GNRPIFKADD TWQFLTRNAK GLYGGAGILK RVLRTGSGCC
201: SGTAKLKKVM KESFSELTLK DTLKPVLIPC YDLKSSGPFL FSRADALETD GYDFRLSEVC RATWAEPGVF EPVEMKSVDG QTKCVAVGGG LAMSNPTAAA
301: ITHVLHNKQE FPFVRGVEDL LVLSLGMGQL LDVSYEYDRI IKWKAKHWAR PAALISNDGA ADTVDQAVAM AFGHCRSSNY VRIQANGSNL GPWSPNMDTD
401: PSGSNVNMLM GVAEEMLKQK NVESVLFGGK RIDEQSNFEK LDWLAGELVL EHQRRNSRIA PTVAFKQSVH RADQKTSDKD IGVTARER

Arabidopsis Description

PLP7Patatin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV43]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.