Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- vacuole 1
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g078530.1.1 | Tomato | cytosol | 97.01 | 97.01 |
| PGSC0003DMT400060932 | Potato | cytosol | 73.56 | 74.59 |
| VIT_10s0092g00150.t01 | Wine grape | cytosol | 60.46 | 61.59 |
| KRH36757 | Soybean | cytosol | 61.38 | 61.52 |
| KRH11757 | Soybean | cytosol | 59.54 | 59.95 |
| GSMUA_Achr8P07160_001 | Banana | cytosol | 45.98 | 52.91 |
| TraesCS5D01G430400.1 | Wheat | cytosol | 47.36 | 52.42 |
| GSMUA_Achr5P02370_001 | Banana | cytosol | 46.9 | 51.91 |
| TraesCS5B01G424100.1 | Wheat | cytosol | 46.67 | 51.65 |
| TraesCS5A01G422200.1 | Wheat | cytosol | 46.9 | 51.13 |
| GSMUA_AchrUn_... | Banana | cytosol | 40.69 | 49.03 |
| GSMUA_Achr11P... | Banana | cytosol | 31.49 | 48.93 |
| GSMUA_Achr5P26630_001 | Banana | cytosol | 38.62 | 48.7 |
| TraesCS5B01G423900.1 | Wheat | cytosol | 49.43 | 48.42 |
| TraesCS5A01G422000.1 | Wheat | cytosol | 48.74 | 48.07 |
| GSMUA_Achr2P01360_001 | Banana | cytosol | 42.76 | 46.62 |
| TraesCS7B01G364900.1 | Wheat | cytosol | 42.99 | 46.17 |
| Zm00001d014386_P001 | Maize | cytosol, plastid | 43.22 | 46.08 |
| TraesCS7A01G464400.1 | Wheat | cytosol | 43.22 | 45.97 |
| Zm00001d034340_P001 | Maize | cytosol | 46.21 | 45.89 |
| EER90785 | Sorghum | cytosol | 47.36 | 45.88 |
| Os03t0784100-00 | Rice | cytosol | 48.97 | 45.32 |
| TraesCS7D01G452000.1 | Wheat | cytosol | 43.22 | 44.87 |
| TraesCS5D01G430300.1 | Wheat | plastid | 49.2 | 44.58 |
| HORVU5Hr1G103060.1 | Barley | mitochondrion | 48.28 | 44.21 |
| PGSC0003DMT400060317 | Potato | cytosol | 47.13 | 43.99 |
| Os03t0640000-00 | Rice | cytosol | 44.6 | 43.99 |
| TraesCSU01G072800.1 | Wheat | cytosol | 44.37 | 43.86 |
| Zm00001d033254_P001 | Maize | cytosol | 43.22 | 43.82 |
| TraesCS5D01G385900.1 | Wheat | cytosol | 44.37 | 43.57 |
| OQU91280 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 42.99 | 43.09 |
| Zm00001d041481_P001 | Maize | cytosol | 44.83 | 42.95 |
| HORVU5Hr1G093250.4 | Barley | cytosol | 44.14 | 42.67 |
| HORVU7Hr1G106600.4 | Barley | cytosol | 24.83 | 42.02 |
| TraesCS5D01G057600.1 | Wheat | cytosol, peroxisome, plastid | 46.21 | 41.88 |
| EER93762 | Sorghum | plastid | 42.76 | 41.8 |
| OQU79585 | Sorghum | cytosol | 46.21 | 41.53 |
| TraesCS5B01G052000.1 | Wheat | cytosol, peroxisome, plastid | 46.21 | 41.53 |
| Zm00001d033256_P001 | Maize | cytosol | 42.07 | 41.31 |
| EER91181 | Sorghum | plastid | 43.68 | 41.21 |
| Zm00001d018788_P001 | Maize | nucleus | 44.14 | 41.2 |
| Zm00001d000203_P001 | Maize | cytosol | 42.07 | 41.12 |
| TraesCS5A01G047000.1 | Wheat | cytosol, peroxisome, plastid | 45.52 | 40.99 |
| PGSC0003DMT400033524 | Potato | cytosol | 35.63 | 40.9 |
| GSMUA_Achr6P31310_001 | Banana | cytosol | 44.14 | 40.85 |
| HORVU5Hr1G011400.6 | Barley | mitochondrion | 41.84 | 40.62 |
| EER97967 | Sorghum | nucleus | 45.06 | 39.84 |
| TraesCS5B01G379300.1 | Wheat | plastid | 44.37 | 39.79 |
| EER90215 | Sorghum | plastid | 42.99 | 39.7 |
| PGSC0003DMT400051868 | Potato | cytosol | 34.71 | 39.53 |
| Os06t0677000-00 | Rice | plastid | 42.07 | 38.05 |
| Zm00001d031053_P001 | Maize | plastid | 42.99 | 33.45 |
| Os07t0144500-00 | Rice | mitochondrion, plastid | 30.57 | 31.97 |
| GSMUA_AchrUn_... | Banana | plastid | 31.95 | 31.59 |
| Os12t0611300-00 | Rice | cytosol, peroxisome, plastid | 36.09 | 30.08 |
| GSMUA_Achr4P31750_001 | Banana | cytosol | 46.67 | 29.77 |
| PGSC0003DMT400025955 | Potato | extracellular | 25.98 | 27.43 |
| PGSC0003DMT400044057 | Potato | cytosol | 5.75 | 26.04 |
| PGSC0003DMT400040802 | Potato | mitochondrion | 8.74 | 25.33 |
| PGSC0003DMT400002019 | Potato | golgi, vacuole | 23.91 | 24.76 |
| PGSC0003DMT400002016 | Potato | cytosol | 14.48 | 24.42 |
| PGSC0003DMT400040781 | Potato | cytosol | 22.07 | 24.06 |
| PGSC0003DMT400044046 | Potato | cytosol | 14.71 | 23.27 |
| PGSC0003DMT400022567 | Potato | extracellular | 17.24 | 21.55 |
| PGSC0003DMT400044055 | Potato | cytosol | 17.93 | 21.43 |
| PGSC0003DMT400058995 | Potato | cytosol | 7.82 | 21.25 |
| PGSC0003DMT400036586 | Potato | cytosol | 9.89 | 18.53 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400021555 | EnsemblPlantsGene:PGSC0003DMG400008357 | EntrezGene:102586354 | Gene3D:3.40.1090.10 | GO:GO:0006629 | GO:GO:0008150 |
| GO:GO:0008152 | InterPro:Acyl_Trfase/lysoPLipase | InterPro:IPR002641 | InterPro:PNPLA_dom | PANTHER:PTHR32241 | PANTHER:PTHR32241:SF6 |
| PFscan:PS51635 | PGSC:PGSC0003DMG400008357 | RefSeq:XP_006362257.1 | SEG:seg | SUPFAM:SSF52151 | UniParc:UPI000296596F |
| UniProt:M1AFB1 | MapMan:5.7.2.2.4 | : | : | : | : |
Description
Patatin B2 [Source:PGSC_GENE;Acc:PGSC0003DMG400008357]
Coordinates
chr10:+:59171347..59173650
Molecular Weight (calculated)
46506.8 Da
IEP (calculated)
8.040
GRAVY (calculated)
-0.138
Length
435 amino acids
Sequence
(BLAST)
(BLAST)
001: MAANSVNTIS MLDSNMEVDK LTNEIFSILE NKFLFGYDDP KKSVTGKEDN LAVQFAGNKN VGAGKVRILS IDAGGSTDGV LAAKSLTHLE STLRRKSGKS
101: DAHIADFFDV VAGSGTGGVL AGLLFTRGAD GVPMFTAEEA LKFIVENGEK ICRSSKTGFF RQVSRPAKVF KKVFGDLTLK DTMKAVLIPC YDLKTGAPFV
201: FSRADAWEMD GCDFAMSDVC GATMADRAVD LKSIDGRSKI TAVGGGIAMT NPTAAAITHV LNNKQEFPFA NGVEDLLVVS LGNGDSDSGT GNVMSSPAAF
301: VKIAGDGTAD MVDQAVSMAF GQTRNNNYVR IQGNGIVGRK YQIIKDENMN KCEKMKKMVV IAEEMLGQKN VECVLFQGKK LVENSNLDKL KTVASELIKE
401: QERRKTSILP PVVLKHASPS PRTSSATTLS SDSSC
101: DAHIADFFDV VAGSGTGGVL AGLLFTRGAD GVPMFTAEEA LKFIVENGEK ICRSSKTGFF RQVSRPAKVF KKVFGDLTLK DTMKAVLIPC YDLKTGAPFV
201: FSRADAWEMD GCDFAMSDVC GATMADRAVD LKSIDGRSKI TAVGGGIAMT NPTAAAITHV LNNKQEFPFA NGVEDLLVVS LGNGDSDSGT GNVMSSPAAF
301: VKIAGDGTAD MVDQAVSMAF GQTRNNNYVR IQGNGIVGRK YQIIKDENMN KCEKMKKMVV IAEEMLGQKN VECVLFQGKK LVENSNLDKL KTVASELIKE
401: QERRKTSILP PVVLKHASPS PRTSSATTLS SDSSC
001: MHRVRNKPVK STATASVKHL IKQRGGDGAT AASKSANDYN NNDSLLTDMQ EPSIDTDKLS YEIFSILESK FLFGYDDSKP EPANSVVAGS IKNQRGKICI
101: LSIDGGGMRG ILPGKALAYL EHALKSKSGD PNARIADYFD VAAGSGIGGI YTAMLFGSRD GNRPIFKADD TWQFLTRNAK GLYGGAGILK RVLRTGSGCC
201: SGTAKLKKVM KESFSELTLK DTLKPVLIPC YDLKSSGPFL FSRADALETD GYDFRLSEVC RATWAEPGVF EPVEMKSVDG QTKCVAVGGG LAMSNPTAAA
301: ITHVLHNKQE FPFVRGVEDL LVLSLGMGQL LDVSYEYDRI IKWKAKHWAR PAALISNDGA ADTVDQAVAM AFGHCRSSNY VRIQANGSNL GPWSPNMDTD
401: PSGSNVNMLM GVAEEMLKQK NVESVLFGGK RIDEQSNFEK LDWLAGELVL EHQRRNSRIA PTVAFKQSVH RADQKTSDKD IGVTARER
101: LSIDGGGMRG ILPGKALAYL EHALKSKSGD PNARIADYFD VAAGSGIGGI YTAMLFGSRD GNRPIFKADD TWQFLTRNAK GLYGGAGILK RVLRTGSGCC
201: SGTAKLKKVM KESFSELTLK DTLKPVLIPC YDLKSSGPFL FSRADALETD GYDFRLSEVC RATWAEPGVF EPVEMKSVDG QTKCVAVGGG LAMSNPTAAA
301: ITHVLHNKQE FPFVRGVEDL LVLSLGMGQL LDVSYEYDRI IKWKAKHWAR PAALISNDGA ADTVDQAVAM AFGHCRSSNY VRIQANGSNL GPWSPNMDTD
401: PSGSNVNMLM GVAEEMLKQK NVESVLFGGK RIDEQSNFEK LDWLAGELVL EHQRRNSRIA PTVAFKQSVH RADQKTSDKD IGVTARER
Arabidopsis Description
PLP7Patatin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV43]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.