Factsheet for GSMUA_Achr5P02370_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
vacuole 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	57.76	62.88
GSMUA_Achr8P07160_001	Banana	cytosol	54.96	57.14
GSMUA_Achr11P...	Banana	cytosol	40.46	56.79
GSMUA_Achr6P31310_001	Banana	cytosol	63.61	53.19
GSMUA_Achr2P01360_001	Banana	cytosol	53.94	53.13
GSMUA_Achr5P26630_001	Banana	cytosol	45.8	52.17
KRH11757	Soybean	cytosol	52.16	47.45
KRH36757	Soybean	cytosol	52.16	47.23
VIT_10s0092g00150.t01	Wine grape	cytosol	51.15	47.07
Solyc10g078530.1.1	Tomato	cytosol	51.91	46.9
PGSC0003DMT400021555	Potato	cytosol	51.91	46.9
Solyc10g080690.1.1	Tomato	cytosol	51.4	46.76
PGSC0003DMT400060932	Potato	cytosol	50.64	46.39
GSMUA_Achr2P12330_001	Banana	cytosol	40.2	39.5
GSMUA_Achr4P31750_001	Banana	cytosol	68.45	39.44
GSMUA_Achr5P03830_001	Banana	cytosol	43.51	39.4
GSMUA_Achr5P18500_001	Banana	cytosol	38.42	38.92
GSMUA_AchrUn_...	Banana	plastid	41.48	37.05
GSMUA_Achr8P18860_001	Banana	cytosol	31.04	36.75
GSMUA_Achr11P...	Banana	mitochondrion	26.46	36.11
GSMUA_Achr7P11810_001	Banana	cytosol	21.12	20.44
GSMUA_Achr10P...	Banana	cytosol	20.87	20.4
GSMUA_Achr11P...	Banana	cytosol	17.3	20.12
GSMUA_Achr2P22340_001	Banana	cytosol	21.12	20.0
GSMUA_Achr3P06850_001	Banana	cytosol	19.59	18.87
GSMUA_Achr7P12940_001	Banana	cytosol	21.37	17.65
GSMUA_Achr9P27010_001	Banana	cytosol	19.08	17.48
GSMUA_Achr7P18980_001	Banana	plastid	18.32	17.43
GSMUA_Achr3P20370_001	Banana	cytosol	18.07	17.15
GSMUA_Achr6P02240_001	Banana	cytosol	17.81	16.95

Protein Annotations

EnsemblPlants:GSMUA_Achr5P02370_001	EnsemblPlants:GSMUA_Achr5T02370_001	EnsemblPlantsGene:GSMUA_Achr5G02370_001	Gene3D:3.40.1090.10	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	InterPro:Acyl_Trfase/lysoPLipase	InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32241	PANTHER:PTHR32241:SF6
PFscan:PS51635	SEG:seg	SUPFAM:SSF52151	UniParc:UPI000296E1B7	UniProt:M0SV16	MapMan:5.7.2.2.4

Description

PLA IIIA/PLP7, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G02370_001]

Coordinates

chr5:-:1494228..1495824

Molecular Weight (calculated)

41662.6 Da

IEP (calculated)

8.460

GRAVY (calculated)

-0.084

Length

393 amino acids

Sequence
(BLAST)

001: MALAPPPLEP SADADKLSYE IFSILESKFL FGYDDPNLLL SSSASSAAAS APRPAGRVRI LSIDGCGRPS DALLAAVSLA RLESSLRRRS CDPSVRVADF
101: FDVAAGRGPL GWLFRRRPGA VLARVFGDAT LRDTVKPVLA PCYDLATGAP FLFSRADAVE ADGYDFRIRE VCAATCADSA LGAAPVEMRS TDGRTWIAAV
201: GGGVTMANPA AAAITHVLNN KREFPFAAGV EDLMVLSLGS TSGGSLGAEG RRRRQVPSAA ELVRIAGDGV ADMVDQAIAM AFGPNGITNY VRIQANGFGS
301: GNYTPKSSNA TKLLSSLEET LSQKNVESLL FRGKKMSDQS NGEKIEWFAS ELAKEDERRK KSRIPVVVLK QVVSPRTSST AASIVIDGDR EKT

Best Arabidopsis Sequence Match ( AT3G54950.1 )
(BLAST)

001: MHRVRNKPVK STATASVKHL IKQRGGDGAT AASKSANDYN NNDSLLTDMQ EPSIDTDKLS YEIFSILESK FLFGYDDSKP EPANSVVAGS IKNQRGKICI
101: LSIDGGGMRG ILPGKALAYL EHALKSKSGD PNARIADYFD VAAGSGIGGI YTAMLFGSRD GNRPIFKADD TWQFLTRNAK GLYGGAGILK RVLRTGSGCC
201: SGTAKLKKVM KESFSELTLK DTLKPVLIPC YDLKSSGPFL FSRADALETD GYDFRLSEVC RATWAEPGVF EPVEMKSVDG QTKCVAVGGG LAMSNPTAAA
301: ITHVLHNKQE FPFVRGVEDL LVLSLGMGQL LDVSYEYDRI IKWKAKHWAR PAALISNDGA ADTVDQAVAM AFGHCRSSNY VRIQANGSNL GPWSPNMDTD
401: PSGSNVNMLM GVAEEMLKQK NVESVLFGGK RIDEQSNFEK LDWLAGELVL EHQRRNSRIA PTVAFKQSVH RADQKTSDKD IGVTARER

Arabidopsis Description

PLP7Patatin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV43]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.