Factsheet for GSMUA_Achr5P03830_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 2
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P12330_001	Banana	cytosol	69.82	75.75
GSMUA_Achr8P18860_001	Banana	cytosol	50.69	66.27
GSMUA_Achr5P18500_001	Banana	cytosol	58.53	65.46
GSMUA_Achr11P...	Banana	mitochondrion	42.86	64.58
VIT_13s0019g04200.t01	Wine grape	cytosol	63.82	60.48
EER95163	Sorghum	cytosol	63.59	60.0
KRH34879	Soybean	cytosol	63.36	59.4
Zm00001d028482_P001	Maize	cytosol	62.67	59.13
Os03t0254400-01	Rice	cytosol	63.59	58.85
PGSC0003DMT400060317	Potato	cytosol	63.13	58.8
Solyc05g056030.2.1	Tomato	cytosol	62.9	58.58
TraesCS4A01G083200.1	Wheat	cytosol	61.29	57.58
TraesCS4D01G221300.1	Wheat	cytosol	60.6	57.3
CDX74862	Canola	cytosol	59.22	57.24
TraesCS4B01G221000.1	Wheat	cytosol	60.37	56.96
CDY24974	Canola	cytosol	61.06	55.67
CDY07662	Canola	cytosol	60.83	55.46
Bra000125.1-P	Field mustard	cytosol	61.06	54.87
Bra005058.1-P	Field mustard	cytosol	61.52	54.83
CDX67618	Canola	mitochondrion	58.53	54.51
CDY44633	Canola	cytosol	60.6	54.12
CDY07512	Canola	mitochondrion	58.99	53.89
Bra003202.1-P	Field mustard	mitochondrion	58.99	53.78
AT2G39220.1	Thale cress	cytosol	60.83	52.91
CDY56960	Canola	mitochondrion	58.76	52.47
AT3G54950.1	Thale cress	mitochondrion	58.76	52.25
CDX73423	Canola	mitochondrion	58.76	51.93
Bra007119.1-P	Field mustard	mitochondrion	58.76	51.41
KRG91895	Soybean	cytosol, extracellular, mitochondrion, plastid	63.13	50.37
HORVU0Hr1G008670.3	Barley	cytosol	44.7	48.02
CDY43526	Canola	nucleus	53.92	47.95
CDX68587	Canola	nucleus	55.07	47.9
AT4G29800.2	Thale cress	cytosol	55.07	45.44
GSMUA_Achr8P07160_001	Banana	cytosol	38.25	43.92
GSMUA_Achr5P02370_001	Banana	cytosol	39.4	43.51
GSMUA_AchrUn_...	Banana	cytosol	35.25	42.38
GSMUA_Achr11P...	Banana	cytosol	27.19	42.14
GSMUA_Achr5P26630_001	Banana	cytosol	31.8	40.0
GSMUA_Achr2P01360_001	Banana	cytosol	36.18	39.35
GSMUA_Achr6P31310_001	Banana	cytosol	39.17	36.17
GSMUA_AchrUn_...	Banana	plastid	28.34	27.95
GSMUA_Achr10P...	Banana	cytosol	25.35	27.36
GSMUA_Achr7P11810_001	Banana	cytosol	25.12	26.85
GSMUA_Achr2P22340_001	Banana	cytosol	24.19	25.3
GSMUA_Achr3P06850_001	Banana	cytosol	23.73	25.25
GSMUA_Achr4P31750_001	Banana	cytosol	39.4	25.07
GSMUA_Achr6P02240_001	Banana	cytosol	22.81	23.97
GSMUA_Achr7P18980_001	Banana	plastid	22.35	23.49
GSMUA_Achr3P20370_001	Banana	cytosol	22.12	23.19
GSMUA_Achr9P27010_001	Banana	cytosol	22.58	22.84
GSMUA_Achr7P12940_001	Banana	cytosol	24.65	22.48
GSMUA_Achr11P...	Banana	cytosol	17.28	22.19

Protein Annotations

EnsemblPlants:GSMUA_Achr5P03830_001	EnsemblPlants:GSMUA_Achr5T03830_001	EnsemblPlantsGene:GSMUA_Achr5G03830_001	Gene3D:3.40.1090.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016042	GO:GO:0016787
InterPro:Acyl_Trfase/lysoPLipase	InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32241	PFAM:PF01734	PFscan:PS51635
SEG:seg	SUPFAM:SSF52151	UniParc:UPI000296E03D	UniProt:M0SVG2	MapMan:5.7.2.2.4	:

Description

Putative Patatin group A-3 [Source:GMGC_GENE;Acc:GSMUA_Achr5G03830_001]

Coordinates

chr5:-:2680013..2681856

Molecular Weight (calculated)

47201.2 Da

IEP (calculated)

5.391

GRAVY (calculated)

-0.230

Length

434 amino acids

Sequence
(BLAST)

001: MGGGVENKEG KGEEEEEEPS IHTDKLSYEM FSVMEDKFLF GCDDHELWVP KAPPLPSPVK SQRGKVCVLC IDGGGGGGMR GILSGKALAY LEQAIRSRSG
101: NTDARISDYF DVAAGTGIGG VFAAMLFATR DGARPIFHAD DTWRLLADHG KILFPKDSPY ACSSSPMEKV MKQAFGERLT LRDTVKPVLI PCYDLRSSAP
201: LVFSRADALE SESFDFRLWE ACRATCAEPG RFEPAEIRSV DRATACVGID GGLAMSNPAA AAITHVLHNK KEFPFVRGVE DIMVLSLGCG ASTVPELERL
301: RRWSAKEWAR PVARIAADSA ADLVDQAVAL AFGQCRSSNY VRIQANPSSM GRGGVDVDCD PSPANAKVLL EAAEEMLKQQ NVESVLFSGR RIGEQTNMER
401: LDWFAGELEL EHRRRSCRVV APTIAFKQAA STST

Best Arabidopsis Sequence Match ( AT2G39220.1 )
(BLAST)

001: MLTTMQRVHN KPIDSIGGFK HLVKQSNGGD GGVTATDMQE PSIETDKLSY EIFSILESKF LFGYDDDLKL MESRSRDPSP EQETASPAMV EALNGVVPGT
101: VKNQRGKVCV LSIDSGGMRG IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED TWRFLAMKGK SFYNKSPPGI
201: LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301: DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG
401: SSFGPCKPNI DTDASPSNVN MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SGDRRVDQQT IFKDIDCMF

Arabidopsis Description

PLP6Patatin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O80959]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.