CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07662	Canola	cytosol	98.74	98.74
CDX74862	Canola	cytosol	84.66	89.75
CDY44633	Canola	cytosol	91.18	89.3
AT2G39220.1	Thale cress	cytosol	90.13	85.97
CDX67618	Canola	mitochondrion	74.16	75.75
CDY07512	Canola	mitochondrion	74.58	74.74
CDX73423	Canola	mitochondrion	76.89	74.54
CDY56960	Canola	mitochondrion	76.05	74.49
VIT_13s0019g04200.t01	Wine grape	cytosol	67.44	70.09
KRH34879	Soybean	cytosol	67.65	69.55
Solyc05g056030.2.1	Tomato	cytosol	64.08	65.45
PGSC0003DMT400060317	Potato	cytosol	63.87	65.24
GSMUA_Achr8P18860_001	Banana	cytosol	43.07	61.75
GSMUA_Achr5P03830_001	Banana	cytosol	55.67	61.06
GSMUA_Achr2P12330_001	Banana	cytosol	51.26	61.0
GSMUA_Achr5P18500_001	Banana	cytosol	48.74	59.79
KRG91895	Soybean	cytosol, extracellular, mitochondrion, plastid	68.07	59.56
GSMUA_Achr11P...	Banana	mitochondrion	34.66	57.29
CDX68587	Canola	nucleus	59.03	56.31
CDY43526	Canola	nucleus	56.93	55.53
EER95163	Sorghum	cytosol	52.1	53.91
Zm00001d028482_P001	Maize	cytosol	51.68	53.48
TraesCS4B01G221000.1	Wheat	cytosol	50.0	51.74
TraesCS4D01G221300.1	Wheat	cytosol	49.79	51.63
Os03t0254400-01	Rice	cytosol	50.63	51.39
TraesCS4A01G083200.1	Wheat	cytosol	49.37	50.87
CDY56455	Canola	cytosol	33.61	43.72
HORVU0Hr1G008670.3	Barley	cytosol	36.55	43.07
CDX76689	Canola	cytosol	33.82	41.82
CDX89181	Canola	cytosol	33.82	41.6
CDX93922	Canola	cytosol	33.4	41.09
CDX75619	Canola	cytosol	24.79	28.92
CDX69269	Canola	cytosol	24.79	28.43
CDX69270	Canola	cytosol, peroxisome, plastid	24.16	28.4
CDY42720	Canola	cytosol	24.58	28.33
CDX72619	Canola	cytosol	24.16	28.19
CDX72620	Canola	cytosol	24.37	28.16
CDX75620	Canola	cytosol, peroxisome, plastid	23.95	28.15
CDX75621	Canola	cytosol	23.32	27.27
CDY21469	Canola	cytosol, peroxisome, vacuole	23.32	27.27
CDX69271	Canola	cytosol	23.11	27.03
CDX83197	Canola	cytosol	22.9	26.78
CDY42719	Canola	cytosol	23.74	15.87

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.4	GO:A0A078GI51	UniProt:A0A078GI51	InterPro:Acyl_Trfase/lysoPLipase	EnsemblPlants:CDY24974
ProteinID:CDY24974	ProteinID:CDY24974.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0016042	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00028775001	InterPro:IPR002641
PFAM:PF01734	InterPro:PNPLA_dom	PFscan:PS51635	PANTHER:PTHR32241	SUPFAM:SSF52151	UniParc:UPI0004EE354B

Description

BnaC03g21980DPatatin [Source:UniProtKB/TrEMBL;Acc:A0A078GI51]

Coordinates

chrLK032166:+:575767..578338

Molecular Weight (calculated)

52304.5 Da

IEP (calculated)

7.057

GRAVY (calculated)

-0.328

Length

476 amino acids

Sequence
(BLAST)

001: MQRVHNKAPS ATVKHHLIKQ SNNGGATAEM EMQEPSIETD KLSYEIFSIL ESKFLFGYDD DPKLMDPEQE TSPTAVNGVV PGSIKNQRGK VCVLSIDGGG
101: MRGIIPGKAL AYLEQALKLK SGDPNARIAD YFDVASGSGI GGIFTAMLFA SNDGDRPIFK ADDTWRFLAK NGKSFYKSQP GKILNRVMKT GSGSKLEKSM
201: KESFAELTLK DTLKPVLIPC YDLASSAPFL FSRADALETD GYDFKLWEVC RATWAEPGVF EPVEMRSVDG KTRCAAVDGG LAMSNPTAAA ITHVLHNKQE
301: FPFVRGVEDL LVLSLGTGQL VDVKYECDKV MKWKAKQWAR PAVRISADGA ADTVDQAVSM AFGQCRRSNY VRIQADGSSF GPCKPNVDTD ASPSNVNMLV
401: GVAEEMLKQK NVESVLFGGK KINEESNFEK LDWLAGELVL EHQRRSCRIA PTVAFKQSTD RRSDQKTIFK DIDCMF

Best Arabidopsis Sequence Match ( AT2G39220.1 )
(BLAST)

001: MLTTMQRVHN KPIDSIGGFK HLVKQSNGGD GGVTATDMQE PSIETDKLSY EIFSILESKF LFGYDDDLKL MESRSRDPSP EQETASPAMV EALNGVVPGT
101: VKNQRGKVCV LSIDSGGMRG IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED TWRFLAMKGK SFYNKSPPGI
201: LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301: DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG
401: SSFGPCKPNI DTDASPSNVN MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SGDRRVDQQT IFKDIDCMF

Arabidopsis Description

PLP6Patatin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O80959]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.