Factsheet for TraesCS4A01G083200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G221300.1	Wheat	cytosol	97.4	98.04
TraesCS4B01G221000.1	Wheat	cytosol	96.97	97.39
Zm00001d028482_P001	Maize	cytosol	87.45	87.83
EER95163	Sorghum	cytosol	87.23	87.61
Os03t0254400-01	Rice	cytosol	86.36	85.07
HORVU0Hr1G008670.3	Barley	cytosol	69.05	78.96
GSMUA_Achr2P12330_001	Banana	cytosol	53.25	61.5
GSMUA_Achr5P03830_001	Banana	cytosol	57.58	61.29
GSMUA_Achr5P18500_001	Banana	cytosol	50.65	60.31
GSMUA_Achr8P18860_001	Banana	cytosol	41.34	57.53
GSMUA_Achr11P...	Banana	mitochondrion	35.71	57.29
KRH34879	Soybean	cytosol	54.76	54.64
VIT_13s0019g04200.t01	Wine grape	cytosol	54.11	54.59
Solyc05g056030.2.1	Tomato	cytosol	52.81	52.36
PGSC0003DMT400060317	Potato	cytosol	52.81	52.36
CDX74862	Canola	cytosol	49.78	51.22
CDX67618	Canola	mitochondrion	50.87	50.43
TraesCS5A01G422200.1	Wheat	cytosol	43.51	50.38
CDY07512	Canola	mitochondrion	51.08	49.68
Bra003202.1-P	Field mustard	mitochondrion	51.08	49.58
CDY24974	Canola	cytosol	50.87	49.37
CDX73423	Canola	mitochondrion	52.16	49.08
CDY07662	Canola	cytosol	50.43	48.95
AT3G54950.1	Thale cress	mitochondrion	51.52	48.77
CDY56960	Canola	mitochondrion	51.3	48.77
Bra005058.1-P	Field mustard	cytosol	51.08	48.46
Bra000125.1-P	Field mustard	cytosol	50.65	48.45
Bra007119.1-P	Field mustard	mitochondrion	51.52	47.98
CDY44633	Canola	cytosol	50.43	47.94
CDY43526	Canola	nucleus	50.43	47.75
CDX68587	Canola	nucleus	51.08	47.29
AT2G39220.1	Thale cress	cytosol	50.87	47.09
TraesCS5A01G422000.1	Wheat	cytosol	44.16	46.26
AT4G29800.2	Thale cress	cytosol	51.95	45.63
KRG91895	Soybean	cytosol, extracellular, mitochondrion, plastid	53.68	45.59
TraesCS7A01G464400.1	Wheat	cytosol	36.8	41.56
TraesCS5A01G047000.1	Wheat	cytosol, peroxisome, plastid	41.34	39.54
TraesCS1A01G407900.1	Wheat	cytosol	14.07	27.31
TraesCS4A01G018100.1	Wheat	cytosol	24.89	27.25
TraesCS5A01G243200.1	Wheat	cytosol	23.81	27.16
TraesCS4A01G345400.1	Wheat	cytosol	12.55	27.1
TraesCS7A01G504400.1	Wheat	cytoskeleton, cytosol, peroxisome	23.38	26.73
TraesCS4A01G449600.1	Wheat	mitochondrion	23.38	25.47
TraesCS4A01G017400.1	Wheat	plastid	23.81	25.4
TraesCS3A01G046500.1	Wheat	plastid	23.81	25.4
TraesCS7A01G504700.1	Wheat	plastid	23.16	25.36
TraesCS4A01G450400.1	Wheat	mitochondrion	23.16	25.24
TraesCS1A01G303400.1	Wheat	cytosol	22.08	25.12
TraesCS7A01G504100.1	Wheat	plastid	22.94	25.12
TraesCS7A01G038300.1	Wheat	mitochondrion	22.94	25.0
TraesCS1A01G059100.1	Wheat	cytosol	22.08	24.94
TraesCS7A01G177300.1	Wheat	cytosol	21.86	24.75
TraesCS1A01G407800.2	Wheat	cytosol	21.0	24.74
TraesCS7A01G504200.1	Wheat	mitochondrion	21.86	24.46
TraesCS2A01G159600.1	Wheat	cytosol	21.43	24.38
TraesCS4A01G345300.1	Wheat	cytosol	21.21	24.38
TraesCS6A01G142200.1	Wheat	cytosol	16.88	23.71
TraesCS6A01G004800.1	Wheat	cytosol	22.51	23.16
TraesCS7A01G012900.1	Wheat	cytosol	20.56	17.3

Protein Annotations

EnsemblPlants:TraesCS4A01G083200.1	EnsemblPlantsGene:TraesCS4A01G083200	Gene3D:3.40.1090.10	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
InterPro:Acyl_Trfase/lysoPLipase	InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32241	PFAM:PF01734	PFscan:PS51635
SEG:seg	SUPFAM:SSF52151	TIGR:cd07199	MapMan:5.7.2.2.4	:	:

Description

No Description!

Coordinates

chr4A:+:86990133..86991614

Molecular Weight (calculated)

48979.0 Da

IEP (calculated)

6.513

GRAVY (calculated)

-0.166

Length

462 amino acids

Sequence
(BLAST)

001: MEEAEEMQVE RVHEDAEHGG ADADKLNYEI FSILESKFLF GYTDPHQLWL PKPPPPPPAQ ASQAAMAATG KAAQRGKVCV LCVDGGGGGL RALLAGRALA
101: HLEAALQRAS GSPDARVADF FDLAAGTGAG GVFAAMLFST HSRGAPLFRA EDTWRLVADH APRLFRRPAG STSLFCRAKK RPLAAPTAAL SVAMKAAFGE
201: ELTLRDTIKP VLISCYDLRS SAPLLFSRAD ALESGSYDFR LSDVGRAAWS EPGRFEPAEV ASVDGVTSCA AVDGGPTMGS PAAAAITHVL HNKHEFPFVR
301: GVEDLLVLSI GGCSGAGGSG ATADADITRM RRWGPKEWAR PIARIAADGA ADLVDHAVAR AFGQCHSSNY LRIQAKRESM PPCGPDGEYD PTQANVQALL
401: AAADEAMKQR NVESVLFEGR RIGEQTNAEK LEWFAAELVA EHRGRGSRIA PTVAFKQAPA LG

Best Arabidopsis Sequence Match ( AT2G39220.1 )
(BLAST)

001: MLTTMQRVHN KPIDSIGGFK HLVKQSNGGD GGVTATDMQE PSIETDKLSY EIFSILESKF LFGYDDDLKL MESRSRDPSP EQETASPAMV EALNGVVPGT
101: VKNQRGKVCV LSIDSGGMRG IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED TWRFLAMKGK SFYNKSPPGI
201: LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301: DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG
401: SSFGPCKPNI DTDASPSNVN MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SGDRRVDQQT IFKDIDCMF

Arabidopsis Description

PLP6Patatin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O80959]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.