Factsheet for Bra003202.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 5
plastid 2
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67618	Canola	mitochondrion	97.69	99.79
Bra007119.1-P	Field mustard	mitochondrion	91.81	88.1
AT3G54950.1	Thale cress	mitochondrion	88.45	86.27
Bra000125.1-P	Field mustard	cytosol	75.21	74.12
Bra005058.1-P	Field mustard	cytosol	75.42	73.72
VIT_13s0019g04200.t01	Wine grape	cytosol	65.97	68.56
KRH34879	Soybean	cytosol	64.29	66.09
Solyc05g056030.2.1	Tomato	cytosol	62.4	63.73
PGSC0003DMT400060317	Potato	cytosol	62.18	63.52
GSMUA_Achr5P18500_001	Banana	cytosol	49.16	60.31
GSMUA_Achr2P12330_001	Banana	cytosol	49.79	59.25
GSMUA_Achr5P03830_001	Banana	cytosol	53.78	58.99
GSMUA_Achr8P18860_001	Banana	cytosol	40.34	57.83
KRG91895	Soybean	cytosol, extracellular, mitochondrion, plastid	64.5	56.43
GSMUA_Achr11P...	Banana	mitochondrion	33.19	54.86
EER95163	Sorghum	cytosol	51.47	53.26
Zm00001d028482_P001	Maize	cytosol	50.84	52.61
TraesCS4B01G221000.1	Wheat	cytosol	50.42	52.17
TraesCS4D01G221300.1	Wheat	cytosol	50.21	52.07
TraesCS4A01G083200.1	Wheat	cytosol	49.58	51.08
Os03t0254400-01	Rice	cytosol	50.21	50.96
HORVU0Hr1G008670.3	Barley	cytosol	35.92	42.33
Bra007735.1-P	Field mustard	cytosol	33.82	41.82
Bra040428.1-P	Field mustard	cytosol	33.82	41.6
Bra011732.1-P	Field mustard	cytosol	22.27	27.75
Bra017799.1-P	Field mustard	cytosol	23.74	27.43
Bra011731.1-P	Field mustard	cytosol, peroxisome, plastid	22.9	26.91
Bra000578.1-P	Field mustard	cytosol	22.9	26.91
Bra011730.1-P	Field mustard	cytosol	22.69	26.47
Bra017798.1-P	Field mustard	cytosol	22.48	26.23

Protein Annotations

EnsemblPlants:Bra003202.1	EnsemblPlants:Bra003202.1-P	EnsemblPlantsGene:Bra003202	Gene3D:3.40.1090.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016042	GO:GO:0016787
InterPro:Acyl_Trfase/lysoPLipase	InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32241	PFAM:PF01734	PFscan:PS51635
SEG:seg	SUPFAM:SSF52151	UniParc:UPI0002541447	UniProt:M4CG69	MapMan:5.7.2.2.4	:

Description

AT3G54950 (E=7e-229) PLP7, PLA IIIA | PLA IIIA (PATATIN-LIKE PROTEIN 6)

Coordinates

chrA07:-:11845176..11846921

Molecular Weight (calculated)

51659.7 Da

IEP (calculated)

8.625

GRAVY (calculated)

-0.283

Length

476 amino acids

Sequence
(BLAST)

001: MQRVRNKPSG GATTASVKHL IKQRGGGDTA ADDSSLLTDT QEPSIDTDKL SYEIFSILES KFLSGSSEPE PVNPAAVTGP AKNQRGKVCI LSIDGGGMRG
101: ILPGKALAYL EHALKSKSGD PNARIADYFD VAAGSGIGGV YTAMLFGSRD GNRPIFKAED TWQFLTKNAK GLYGSFVKRV MRTGSLGSSG TGKLKRVMKE
201: CFSELTLKDT LKPVLIPCYD LKSSAPFLFS RADALETDGY DFRLWEVCRA TWAEPGVFEP VEMKSVDGTT KCVAIGGGLA MSNPTAAAIT HVLHNKQEFP
301: FVRGVEDLLV LSLGMGQLID VSYEYDRIIK WTSKHWARPA ALISNDGAAD TVDQAVAMAF GHCRSSNYVR IQANGSSLGP WKPNIDTDPS GSNVNMLVGV
401: AEEMLKQKNV ESVLFGGKII NEQSNFEKLD WLAGELVLEH QRRNCRIAPT VAFKQSVHRA EQKTRGKDIG VTARER

Best Arabidopsis Sequence Match ( AT3G54950.1 )
(BLAST)

001: MHRVRNKPVK STATASVKHL IKQRGGDGAT AASKSANDYN NNDSLLTDMQ EPSIDTDKLS YEIFSILESK FLFGYDDSKP EPANSVVAGS IKNQRGKICI
101: LSIDGGGMRG ILPGKALAYL EHALKSKSGD PNARIADYFD VAAGSGIGGI YTAMLFGSRD GNRPIFKADD TWQFLTRNAK GLYGGAGILK RVLRTGSGCC
201: SGTAKLKKVM KESFSELTLK DTLKPVLIPC YDLKSSGPFL FSRADALETD GYDFRLSEVC RATWAEPGVF EPVEMKSVDG QTKCVAVGGG LAMSNPTAAA
301: ITHVLHNKQE FPFVRGVEDL LVLSLGMGQL LDVSYEYDRI IKWKAKHWAR PAALISNDGA ADTVDQAVAM AFGHCRSSNY VRIQANGSNL GPWSPNMDTD
401: PSGSNVNMLM GVAEEMLKQK NVESVLFGGK RIDEQSNFEK LDWLAGELVL EHQRRNSRIA PTVAFKQSVH RADQKTSDKD IGVTARER

Arabidopsis Description

PLP7Patatin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV43]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.