Factsheet for TraesCS4B01G221000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G221300.1	Wheat	cytosol	97.83	98.04
TraesCS4A01G083200.1	Wheat	cytosol	97.39	96.97
Zm00001d028482_P001	Maize	cytosol	87.17	87.17
EER95163	Sorghum	cytosol	86.96	86.96
Os03t0254400-01	Rice	cytosol	86.74	85.07
HORVU0Hr1G008670.3	Barley	cytosol	69.35	78.96
GSMUA_Achr2P12330_001	Banana	cytosol	53.26	61.25
GSMUA_Achr5P03830_001	Banana	cytosol	56.96	60.37
GSMUA_Achr5P18500_001	Banana	cytosol	50.22	59.54
GSMUA_Achr8P18860_001	Banana	cytosol	41.52	57.53
GSMUA_Achr11P...	Banana	mitochondrion	35.22	56.25
KRH34879	Soybean	cytosol	55.0	54.64
VIT_13s0019g04200.t01	Wine grape	cytosol	54.35	54.59
Solyc05g056030.2.1	Tomato	cytosol	53.04	52.36
PGSC0003DMT400060317	Potato	cytosol	53.04	52.36
CDX74862	Canola	cytosol	50.65	51.89
TraesCS5B01G424100.1	Wheat	cytosol	43.91	51.4
CDX67618	Canola	mitochondrion	51.96	51.29
Bra003202.1-P	Field mustard	mitochondrion	52.17	50.42
CDY07512	Canola	mitochondrion	51.96	50.32
CDY24974	Canola	cytosol	51.74	50.0
CDY56960	Canola	mitochondrion	52.39	49.59
CDY07662	Canola	cytosol	51.3	49.58
AT3G54950.1	Thale cress	mitochondrion	52.39	49.39
CDX73423	Canola	mitochondrion	52.61	49.29
Bra005058.1-P	Field mustard	cytosol	51.96	49.08
Bra000125.1-P	Field mustard	cytosol	51.52	49.07
Bra007119.1-P	Field mustard	mitochondrion	52.61	48.79
CDY44633	Canola	cytosol	51.3	48.56
CDY43526	Canola	nucleus	50.65	47.75
AT2G39220.1	Thale cress	cytosol	51.74	47.7
CDX68587	Canola	nucleus	51.3	47.29
TraesCS5B01G423900.1	Wheat	cytosol	44.57	46.17
AT4G29800.2	Thale cress	cytosol	52.39	45.82
KRG91895	Soybean	cytosol, extracellular, mitochondrion, plastid	53.91	45.59
TraesCS7B01G364900.1	Wheat	cytosol	36.3	41.23
TraesCS5B01G052000.1	Wheat	cytosol, peroxisome, plastid	41.74	39.67
TraesCS5B01G379300.1	Wheat	plastid	41.52	39.38
TraesCS4B01G286000.1	Wheat	mitochondrion	26.3	28.61
TraesCS5B01G241100.2	Wheat	cytosol	25.0	28.19
TraesCS7B01G411800.1	Wheat	plastid	25.22	27.1
TraesCS7B01G411200.1	Wheat	plastid	23.91	26.07
TraesCS6B01G170200.1	Wheat	plastid	23.91	25.88
TraesCS4B01G286600.1	Wheat	plastid	24.35	25.87
TraesCS3B01G036800.1	Wheat	plastid	24.35	25.81
TraesCS2B01G185200.1	Wheat	cytosol	22.83	25.8
TraesCS7B01G411300.1	Wheat	mitochondrion	23.48	25.78
TraesCS5B01G529000.1	Wheat	cytosol	21.96	25.44
TraesCS5B01G529100.1	Wheat	cytosol	21.52	25.26
TraesCS1B01G077500.1	Wheat	cytosol, peroxisome, plastid	22.39	25.25
TraesCS1B01G313800.1	Wheat	cytosol	21.96	24.88
TraesCS7B01G082400.1	Wheat	cytosol	21.96	24.75
TraesCS3B01G036100.1	Wheat	cytosol	13.7	23.16
TraesCS6B01G009800.1	Wheat	cytosol	20.87	21.48
TraesCS3B01G036500.1	Wheat	plastid	19.57	20.27
TraesCS3B01G001300.1	Wheat	cytosol	22.61	19.22

Protein Annotations

EnsemblPlants:TraesCS4B01G221000.1	EnsemblPlantsGene:TraesCS4B01G221000	Gene3D:3.40.1090.10	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
InterPro:Acyl_Trfase/lysoPLipase	InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32241	PFAM:PF01734	PFscan:PS51635
SEG:seg	SUPFAM:SSF52151	TIGR:cd07199	MapMan:5.7.2.2.4	:	:

Description

No Description!

Coordinates

chr4B:-:464953674..464955149

Molecular Weight (calculated)

48957.2 Da

IEP (calculated)

6.511

GRAVY (calculated)

-0.131

Length

460 amino acids

Sequence
(BLAST)

001: MEEAEEMQVE RVHEDAEHGG ADADKLNYEI FSILESKFLF GYTDPHQLWL PKPPPPAQAS QAALAVPVKA AQRGKVCVLC VDGGGGGLRA LLAGRALAHL
101: EAALQRASGS PDARVADYFD LAAGTGAGGV FAAMLFSTHS RGAPLFRAED TWRLVADHAL RLFRRPAGST SLFCRAKKRP LAAPTAALSV AMKAAFGEEL
201: TLRDTIKPVL ISCYDLKSCA PLLFSRADAL ESGSYDFRLS DVGRAAWSEP GRFEPAEVAS VDGVTSCAAV DGGPTMGSPA AAAITHVLHN KHEFPFVRGV
301: EDLLVLSIGG CSGAGGSGAT ADADIMRMRR WGPKEWARPI ARIAADGAAD LVDHAVARAF GQCHSSNYLR IQAKRESMPP CGPDGEYDPT QANVQALLAV
401: ADETMKQRNV ESVLFEGRRI GEQTNAEKLE WFAAELVAEH RGRGSRIAPT VAFKQSPALG

Best Arabidopsis Sequence Match ( AT3G54950.1 )
(BLAST)

001: MHRVRNKPVK STATASVKHL IKQRGGDGAT AASKSANDYN NNDSLLTDMQ EPSIDTDKLS YEIFSILESK FLFGYDDSKP EPANSVVAGS IKNQRGKICI
101: LSIDGGGMRG ILPGKALAYL EHALKSKSGD PNARIADYFD VAAGSGIGGI YTAMLFGSRD GNRPIFKADD TWQFLTRNAK GLYGGAGILK RVLRTGSGCC
201: SGTAKLKKVM KESFSELTLK DTLKPVLIPC YDLKSSGPFL FSRADALETD GYDFRLSEVC RATWAEPGVF EPVEMKSVDG QTKCVAVGGG LAMSNPTAAA
301: ITHVLHNKQE FPFVRGVEDL LVLSLGMGQL LDVSYEYDRI IKWKAKHWAR PAALISNDGA ADTVDQAVAM AFGHCRSSNY VRIQANGSNL GPWSPNMDTD
401: PSGSNVNMLM GVAEEMLKQK NVESVLFGGK RIDEQSNFEK LDWLAGELVL EHQRRNSRIA PTVAFKQSVH RADQKTSDKD IGVTARER

Arabidopsis Description

PLP7Patatin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV43]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.