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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 2
  • cytosol 1
  • mitochondrion 1
  • nucleus 2
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, nucleus, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY43526 Canola nucleus 95.99 98.16
AT4G29800.2 Thale cress cytosol 92.38 87.64
VIT_13s0019g04200.t01 Wine grape cytosol 59.72 65.07
KRH34879 Soybean cytosol 58.72 63.28
Solyc05g056030.2.1 Tomato cytosol 57.72 61.8
CDX74862 Canola cytosol 55.51 61.69
PGSC0003DMT400060317 Potato cytosol 57.31 61.37
CDX67618 Canola mitochondrion 56.71 60.73
CDY07512 Canola mitochondrion 57.52 60.42
CDY24974 Canola cytosol 56.31 59.03
CDY07662 Canola cytosol 56.31 59.03
CDY56960 Canola mitochondrion 56.91 58.44
CDX73423 Canola mitochondrion 57.31 58.25
CDY44633 Canola cytosol 56.71 58.23
GSMUA_Achr8P18860_001 Banana cytosol 37.68 56.63
GSMUA_Achr2P12330_001 Banana cytosol 45.29 56.5
GSMUA_Achr5P18500_001 Banana cytosol 43.29 55.67
GSMUA_Achr5P03830_001 Banana cytosol 47.9 55.07
KRG91895 Soybean cytosol, extracellular, mitochondrion, plastid 59.12 54.23
TraesCS4B01G221000.1 Wheat cytosol 47.29 51.3
TraesCS4D01G221300.1 Wheat cytosol 47.09 51.2
TraesCS4A01G083200.1 Wheat cytosol 47.29 51.08
EER95163 Sorghum cytosol 46.49 50.43
Zm00001d028482_P001 Maize cytosol 46.29 50.22
GSMUA_Achr11P... Banana mitochondrion 28.86 50.0
Os03t0254400-01 Rice cytosol 46.49 49.47
CDY56455 Canola cytosol 32.06 43.72
HORVU0Hr1G008670.3 Barley cytosol 34.27 42.33
CDX93922 Canola cytosol 32.67 42.12
CDX89181 Canola cytosol 32.67 42.12
CDX76689 Canola cytosol 32.46 42.08
CDX72619 Canola cytosol 21.64 26.47
CDX75619 Canola cytosol 21.64 26.47
CDX69270 Canola cytosol, peroxisome, plastid 21.44 26.42
CDX75620 Canola cytosol, peroxisome, plastid 21.44 26.42
CDX75621 Canola cytosol 21.24 26.04
CDX69269 Canola cytosol 21.64 26.02
CDX72620 Canola cytosol 21.24 25.73
CDY42720 Canola cytosol 21.24 25.67
CDY21469 Canola cytosol, peroxisome, vacuole 20.84 25.55
CDX83197 Canola cytosol 20.44 25.06
CDX69271 Canola cytosol 20.44 25.06
CDY42719 Canola cytosol 21.04 14.75
Protein Annotations
EnsemblPlants:CDX68587EnsemblPlantsGene:GSBRNA2T00130224001Gene3D:3.40.1090.10GO:A0A078BWJ5GO:GO:0006629GO:GO:0008150
GO:GO:0008152InterPro:Acyl_Trfase/lysoPLipaseInterPro:IPR002641InterPro:PNPLA_domPANTHER:PTHR32241PFAM:PF01734
PFscan:PS51635ProteinID:CDX68587ProteinID:CDX68587.1SEG:segSUPFAM:SSF52151UniParc:UPI0004EE3B05
MapMan:5.7.2.2.4:::::
Description
BnaC01g08660D
Coordinates
chrLK031789:-:18041..19718
Molecular Weight (calculated)
54359.4 Da
IEP (calculated)
9.455
GRAVY (calculated)
-0.387
Length
499 amino acids
Sequence
(BLAST)
001: MYRRYDKPPP LAVSSKENKK KKHFANHTAP NTPGNHERTQ ASPTLSTARS HEPFIDSSDG KLSYEIFSIL ESKFLFGYED PRLSWIPRSP PRGRICVLSI
101: DGGGMRGLLA GKSLIYLEQM LKEKSGDPNA RIADYFDVAA GSGIGGVFSA MMFATRDGNR PMFKADDTWK FLVDNAESFY RSGGGGGGGG AGAAIKRVMR
201: SGSSSSSSVS AATAKLEKAM KASFADLTLK DTLKPILISC YDLSSTAPLL FSRADALESD SFDFRLRDIC RATWAEPGTF DPVRTSSVDG KTRCVAVGGG
301: LAMSNPTAAA ITHVFHNKQE FPAVKGVEDM LVLSLGTGQL FEVNYDYEQV KNWRVKEWAR PMARISGDGS AEFVDQAVAM GFGPYRSSNY VRIQQANGSR
401: LGACGPNVDT DPRAENVKKL TEIADEMLKQ NNVESVLFGG KRIGEMSNSD KLEWFASELV IEQQRRSVSA SPTVTLKQAV SKTNRNAINA TLTLISKER
Best Arabidopsis Sequence Match ( AT4G29800.2 )
(BLAST)
001: MNRRYEKPPP LSVSSKGKKK HFVNHTAPNT PGNYERTQTS PTLSTARSHE PDDKLNYEIF SILESKFLFG YEDPRLLWIP QSPLRPGDSE AGPSPRSPLT
101: PNGVVLPGTP SSSFRSPRGR ICVLSIDGGG MRGLLAGKSL IYLEQMLKEK SGDPNARIAD YFDVAAGSGV GGVFAAMIFA TRDGNRPIFK AEDTWKFLVE
201: NAEGFYRSGS GSGGGGAGAA IKRVIRSGSG SGSSSVTAAT AKLEKAMKAS FADLTLKDTL KPILISCYDL SSTAPFLFSR ADALESDSFD FRLRDICRAT
301: WAEPGTFDPV RTCSVDGKTR CVAVGGGLAM SNPTAAAITH VFHNKQEFPA VKGVEDLLVL SLGTGQLFEV NYDYEQVKNW RVKEWARPMA RISGDGSAEF
401: VDQAVAMGFG PYRSSNYVRI QQANGSRLGA CGPNVDTDPR AENVKKLTEI ADEMLKQNNV ESVLFGSKRI GEMSNSEKIE WFASELVIEQ QRRSVRASPT
501: VTLKQAVSKT NRNAINATLT LISKDR
Arabidopsis Description
PLP8PATATIN-like protein 8 [Source:TAIR;Acc:AT4G29800]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.