CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42720	Canola	cytosol	91.75	91.53
CDX75621	Canola	cytosol	83.25	84.28
CDX69271	Canola	cytosol	82.04	83.05
AT4G37050.1	Thale cress	cytosol	84.71	81.54
KRH28482	Soybean	cytosol	60.68	62.03
PGSC0003DMT400040781	Potato	cytosol	59.47	61.4
VIT_07s0031g00860.t01	Wine grape	cytosol	60.44	61.03
Solyc02g090630.2.1	Tomato	cytosol	58.01	60.51
VIT_07s0031g00870.t01	Wine grape	cytosol	59.22	59.95
CDX72619	Canola	cytosol	59.22	59.8
VIT_07s0031g00850.t01	Wine grape	cytosol, peroxisome, plastid	58.01	59.45
CDX75619	Canola	cytosol	58.74	59.31
CDX75620	Canola	cytosol, peroxisome, plastid	58.01	59.01
CDX69270	Canola	cytosol, peroxisome, plastid	57.77	58.77
CDX69269	Canola	cytosol	57.28	56.87
CDX83197	Canola	cytosol	56.07	56.76
CDY21469	Canola	cytosol, peroxisome, vacuole	56.07	56.76
GSMUA_Achr3P06850_001	Banana	cytosol	55.83	56.37
CDY42719	Canola	cytosol	58.25	33.71
CDX74862	Canola	cytosol	27.43	25.17
CDY07662	Canola	cytosol	28.16	24.37
CDY24974	Canola	cytosol	28.16	24.37
CDX89181	Canola	cytosol	22.82	24.29
CDY44633	Canola	cytosol	28.4	24.07
CDX93922	Canola	cytosol	22.57	24.03
CDX67618	Canola	mitochondrion	26.94	23.82
CDY56455	Canola	cytosol	20.87	23.5
CDY56960	Canola	mitochondrion	27.43	23.25
CDX76689	Canola	cytosol	21.6	23.12
CDX73423	Canola	mitochondrion	27.43	23.01
CDY07512	Canola	mitochondrion	26.21	22.74
CDY43526	Canola	nucleus	25.49	21.52
CDX68587	Canola	nucleus	25.73	21.24

Protein Annotations

EnsemblPlants:CDX72620	EnsemblPlantsGene:GSBRNA2T00100168001	Gene3D:3.40.1090.10	GO:A0A078C773	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	InterPro:Acyl_Trfase/lysoPLipase	InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32176	PANTHER:PTHR32176:SF24
PFAM:PF01734	PFscan:PS51635	ProteinID:CDX72620	ProteinID:CDX72620.1	SEG:seg	SUPFAM:SSF52151
UniParc:UPI0004EB0D5A	MapMan:5.7.2.2.3	:	:	:	:

Description

BnaC07g46420D

Coordinates

chrLK031796:+:2221698..2224149

Molecular Weight (calculated)

45992.9 Da

IEP (calculated)

6.324

GRAVY (calculated)

-0.298

Length

412 amino acids

Sequence
(BLAST)

001: MDFSSERRVS CLPPSYGQLV TILSIDGGGI RGIIPGTILA YLESQLQELD GEEARLVDYF DVISGTSTGG LIVAMLTAED KEFKSSRNRN RPLFAAKEIV
101: SFYLKHSPKI FPQSRGMCSW AQTMRRLVCG PKYNGKYLHE VIQGYLGDTR LTQTMTNVVI PCFDIKKLQP VIFSSYQAVN HQVIDAKLSD ICISTSAAPT
201: YFPAHRFTNE DNEGNKHEFN LIDGGIAANN PTLCAIAEVT KQIVKKNPAM GEISPLDYTR FVVISLGTGS IRNQEKYDAK MASKWGMLSW IYGNGSTPIL
301: DCYSEAIHDM VDYQSSVVFQ ALRSENNYLR IDDDTLKGDL TSVDLSTEEN MEGLVQVGEA LLKKNVSRVN LETGHYEPIS DHVTNEEALK RFAKVLSEER
401: KLRESRSPKL KT

Best Arabidopsis Sequence Match ( AT4G37050.1 )
(BLAST)

001: MDTERGSISS SEISRTAHLQ DRTVACLPPS YGQLVTILSI DGGGIRGIIP GTILAYLESQ LQELDGEEAR LVDYFDVISG TSTGGLIVAM LTAQDQSGGH
101: SRNSNRPLFE AKEIVPFYLK HSPKIFPQPR GIFCGWGETI VRLVGGPKFN GKYLHDLVEG FLGDTKLTQS LTNVVIPCFD IKKLQPVIFS SYQAVNNQAM
201: NAKLSDICIS TSAAPTFFPA HRFTNEDSEG IKHEFNLIDG GIAANNPTLC AIAEVTKQII KKNPVMGDIS PLDFTRFLVI SIGTGSIRNQ EKYNAKMASK
301: WGLMCWVFES GSTPILDCYS EAIHDMVDYQ SSVVFQALRS EKNYLRIDDD SLKGDLGSVD ISTEKNMEGL VEVGEALLKK RVSRVNLESG HYQPISENVT
401: NEEALKRFAK VLSEERKLRE SRSPKLKI

Arabidopsis Description

PLP3Patatin-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O23181]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.