Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74862 | Canola | cytosol | 90.33 | 97.77 |
| CDY07662 | Canola | cytosol | 89.71 | 91.6 |
| CDY24974 | Canola | cytosol | 89.3 | 91.18 |
| AT2G39220.1 | Thale cress | cytosol | 87.04 | 84.77 |
| CDX67618 | Canola | mitochondrion | 73.46 | 76.61 |
| CDY07512 | Canola | mitochondrion | 73.87 | 75.58 |
| CDX73423 | Canola | mitochondrion | 75.93 | 75.15 |
| CDY56960 | Canola | mitochondrion | 74.9 | 74.9 |
| VIT_13s0019g04200.t01 | Wine grape | cytosol | 65.02 | 69.0 |
| KRH34879 | Soybean | cytosol | 65.02 | 68.25 |
| Solyc05g056030.2.1 | Tomato | cytosol | 61.93 | 64.59 |
| PGSC0003DMT400060317 | Potato | cytosol | 61.73 | 64.38 |
| GSMUA_Achr8P18860_001 | Banana | cytosol | 41.56 | 60.84 |
| GSMUA_Achr5P03830_001 | Banana | cytosol | 54.12 | 60.6 |
| GSMUA_Achr2P12330_001 | Banana | cytosol | 49.18 | 59.75 |
| GSMUA_Achr5P18500_001 | Banana | cytosol | 47.12 | 59.02 |
| KRG91895 | Soybean | cytosol, extracellular, mitochondrion, plastid | 65.02 | 58.09 |
| CDX68587 | Canola | nucleus | 58.23 | 56.71 |
| CDY43526 | Canola | nucleus | 56.58 | 56.35 |
| GSMUA_Achr11P... | Banana | mitochondrion | 32.92 | 55.56 |
| EER95163 | Sorghum | cytosol | 50.21 | 53.04 |
| Zm00001d028482_P001 | Maize | cytosol | 49.79 | 52.61 |
| TraesCS4B01G221000.1 | Wheat | cytosol | 48.56 | 51.3 |
| TraesCS4D01G221300.1 | Wheat | cytosol | 48.35 | 51.2 |
| Os03t0254400-01 | Rice | cytosol | 49.18 | 50.96 |
| TraesCS4A01G083200.1 | Wheat | cytosol | 47.94 | 50.43 |
| HORVU0Hr1G008670.3 | Barley | cytosol | 35.6 | 42.82 |
| CDY56455 | Canola | cytosol | 32.1 | 42.62 |
| CDX76689 | Canola | cytosol | 32.51 | 41.04 |
| CDX93922 | Canola | cytosol | 32.51 | 40.83 |
| CDX89181 | Canola | cytosol | 32.51 | 40.83 |
| CDX75619 | Canola | cytosol | 24.28 | 28.92 |
| CDX69270 | Canola | cytosol, peroxisome, plastid | 23.87 | 28.64 |
| CDX75620 | Canola | cytosol, peroxisome, plastid | 23.87 | 28.64 |
| CDY42720 | Canola | cytosol | 24.28 | 28.57 |
| CDX69269 | Canola | cytosol | 24.28 | 28.43 |
| CDX72620 | Canola | cytosol | 24.07 | 28.4 |
| CDX72619 | Canola | cytosol | 23.66 | 28.19 |
| CDX75621 | Canola | cytosol | 23.25 | 27.76 |
| CDX69271 | Canola | cytosol | 22.84 | 27.27 |
| CDY21469 | Canola | cytosol, peroxisome, vacuole | 22.84 | 27.27 |
| CDX83197 | Canola | cytosol | 22.43 | 26.78 |
| CDY42719 | Canola | cytosol | 23.25 | 15.87 |
Protein Annotations
| Gene3D:3.40.1090.10 | MapMan:5.7.2.2.4 | GO:A0A078I698 | UniProt:A0A078I698 | InterPro:Acyl_Trfase/lysoPLipase | EnsemblPlants:CDY44633 |
| ProteinID:CDY44633 | ProteinID:CDY44633.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0016042 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00080587001 | InterPro:IPR002641 |
| PFAM:PF01734 | InterPro:PNPLA_dom | PFscan:PS51635 | PANTHER:PTHR32241 | SUPFAM:SSF52151 | UniParc:UPI0004EF120D |
Description
BnaC04g06290DPatatin [Source:UniProtKB/TrEMBL;Acc:A0A078I698]
Coordinates
chrLK032597:-:134904..136764
Molecular Weight (calculated)
53012.2 Da
IEP (calculated)
6.774
GRAVY (calculated)
-0.271
Length
486 amino acids
Sequence
(BLAST)
(BLAST)
001: MQRVHNKPVD SIGKSPSATV KHHLIKQSSG GVTTAVTAAD MQEPSIDTDK LSYEIFSILE SKFLFGYDDP SPEQETSPTV AEPLNGVVPG SVKNQRGKVC
101: VLSIDGGGMR GIIPGKALAY LEQALKSKSG DPNARIADYF DVASGSGIGG VFTAMLFASS DGDRPIFNAD DTWRFLAKNG KRFYKPASGT GRILNRVMQT
201: GSGSKKLEKS MKESFAEMTL KDTLKPVLIP CYDLTSSAPF LFSRADALET DGYDFKLWEV CRATWAEPGV FEPVEMRSVD GKTRCVAVDG GLAMSNPTAA
301: AITHVLHNKE EFPFVRGVED LLVLSLGTGQ LVDVKYECDN VMKWKAKQWA RPAVRISADG AADTVDQAVS MAFGQCRSNY VRIQADGSSF GPCRPNIDTD
401: ASASNVNMLV GVAEEMLKQK NVESVMFGGK KISEESNFEK LDWLAGELVL EHQRRSCRIA PTVAFKQSSD RRTVQKTIFK DIDCMF
101: VLSIDGGGMR GIIPGKALAY LEQALKSKSG DPNARIADYF DVASGSGIGG VFTAMLFASS DGDRPIFNAD DTWRFLAKNG KRFYKPASGT GRILNRVMQT
201: GSGSKKLEKS MKESFAEMTL KDTLKPVLIP CYDLTSSAPF LFSRADALET DGYDFKLWEV CRATWAEPGV FEPVEMRSVD GKTRCVAVDG GLAMSNPTAA
301: AITHVLHNKE EFPFVRGVED LLVLSLGTGQ LVDVKYECDN VMKWKAKQWA RPAVRISADG AADTVDQAVS MAFGQCRSNY VRIQADGSSF GPCRPNIDTD
401: ASASNVNMLV GVAEEMLKQK NVESVMFGGK KISEESNFEK LDWLAGELVL EHQRRSCRIA PTVAFKQSSD RRTVQKTIFK DIDCMF
001: MLTTMQRVHN KPIDSIGGFK HLVKQSNGGD GGVTATDMQE PSIETDKLSY EIFSILESKF LFGYDDDLKL MESRSRDPSP EQETASPAMV EALNGVVPGT
101: VKNQRGKVCV LSIDSGGMRG IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED TWRFLAMKGK SFYNKSPPGI
201: LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301: DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG
401: SSFGPCKPNI DTDASPSNVN MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SGDRRVDQQT IFKDIDCMF
101: VKNQRGKVCV LSIDSGGMRG IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED TWRFLAMKGK SFYNKSPPGI
201: LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301: DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG
401: SSFGPCKPNI DTDASPSNVN MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SGDRRVDQQT IFKDIDCMF
Arabidopsis Description
PLP6Patatin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O80959]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.