CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011730.1-P	Field mustard	cytosol	99.26	99.26
CDX69269	Canola	cytosol	97.06	95.42
CDX72619	Canola	cytosol	86.27	86.27
AT4G37070.2	Thale cress	cytosol, peroxisome, plastid	84.56	83.33
CDX69270	Canola	cytosol, peroxisome, plastid	79.41	80.0
CDX75620	Canola	cytosol, peroxisome, plastid	79.17	79.75
AT4G37060.2	Thale cress	cytosol, golgi, plastid	79.9	73.26
VIT_07s0031g00860.t01	Wine grape	cytosol	58.82	58.82
CDX72620	Canola	cytosol	59.31	58.74
KRH28482	Soybean	cytosol	57.11	57.82
CDX75621	Canola	cytosol	57.6	57.74
PGSC0003DMT400040781	Potato	cytosol	56.37	57.64
CDX69271	Canola	cytosol	57.35	57.49
CDY42720	Canola	cytosol	58.09	57.38
Solyc02g090630.2.1	Tomato	cytosol	54.9	56.71
VIT_07s0031g00870.t01	Wine grape	cytosol	55.88	56.02
VIT_07s0031g00850.t01	Wine grape	cytosol, peroxisome, plastid	54.9	55.72
GSMUA_Achr3P06850_001	Banana	cytosol	51.72	51.72
CDX83197	Canola	cytosol	51.23	51.35
CDY21469	Canola	cytosol, peroxisome, vacuole	50.74	50.86
CDY42719	Canola	cytosol	85.29	48.88
CDX74862	Canola	cytosol	27.94	25.39
CDX89181	Canola	cytosol	23.77	25.06
CDX93922	Canola	cytosol	23.53	24.81
CDY07662	Canola	cytosol	28.92	24.79
CDY24974	Canola	cytosol	28.92	24.79
CDY56455	Canola	cytosol	21.81	24.32
CDY44633	Canola	cytosol	28.92	24.28
CDX76689	Canola	cytosol	22.79	24.16
CDX67618	Canola	mitochondrion	25.98	22.75
CDY56960	Canola	mitochondrion	26.96	22.63
CDX73423	Canola	mitochondrion	27.21	22.61
CDY43526	Canola	nucleus	26.23	21.93
CDY07512	Canola	mitochondrion	25.25	21.68
CDX68587	Canola	nucleus	26.47	21.64

Protein Annotations

EnsemblPlants:CDX75619	EnsemblPlantsGene:GSBRNA2T00121531001	Gene3D:3.40.1090.10	GO:A0A078CHT3	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	InterPro:Acyl_Trfase/lysoPLipase	InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32176	PANTHER:PTHR32176:SF6
PFAM:PF01734	PFscan:PS51635	ProteinID:CDX75619	ProteinID:CDX75619.1	SEG:seg	SUPFAM:SSF52151
UniParc:UPI0004EEBF11	MapMan:5.7.2.2.3	:	:	:	:

Description

BnaA01g00830D

Coordinates

chrLK031804:+:1938134..1940911

Molecular Weight (calculated)

45052.5 Da

IEP (calculated)

8.046

GRAVY (calculated)

-0.285

Length

408 amino acids

Sequence
(BLAST)

001: MEDGSSCKKN KPPSWGKLVT ILSLDGGGVR GIIAGVILAY LEKQLQEIDG EDVRLADYFD VVSGTSTGGL MTAMLTVPGK NGRPQLAAKD IVPFYLEHCP
101: KIFPQPEGLG ALLPKLPKLL SGPKYSGKYL RKLLSKLLGE TKLHQTVTNV VIPTFDMKKL QPTIFSSYQA LIDPSLDVKI SDICLGTSAA PTFFPPHYFS
201: NEDNQGKTTE FNLVDGAVTA NNPTLVAMTA VTKQILKNNP DMGKLKPLGY DKFLVISIGT GSSKNEEKYS AKKAAKWGII SWLYNDGSTP ILDMVSDSGR
301: DMIHFHSSVL FKALQSEDKY LRIDDDTLEG DVSSMDLATK SNLENLVKIG EKVLKNRVMH MNIDTGVYEP ITENITNEEE LKRFAKILSD ERRLRRMRSQ
401: TMVQDPSN

Best Arabidopsis Sequence Match ( AT4G37070.2 )
(BLAST)

001: MENKSPSKKN KPPSCGSLVT ILSLDGGGVR GIIAGVILAF LEKQLQELDG EEARLADYFD VIAGTSTGGL VTAMLTVPDE TGRPHFAAKD IVPFYLEHCP
101: KIFPQPTGVL ALLPKLPKLL SGPKYSGKYL RNLLSKLLGE TRLHQTLTNI VIPTFDIKKL QPTIFSSYQL LVDPSLDVKV SDICIGTSAA PTFFPPHYFS
201: NEDSQGNKTE FNLVDGAVTA NNPTLVAMTA VSKQIVKNNP DMGKLKPLGF DRFLVISIGT GSTKREEKYS AKKAAKWGII SWLYDDGSTP ILDITMESSR
301: DMIHYHSSVV FKALQSEDKY LRIDDDTLEG DVSTMDLATK SNLENLQKIG EKMLTNRVMQ MNIDTGVYEP VAENITNDEQ LKRYAKILSD ERKLRRLRSD
401: TMIKDSSNES QEIK

Arabidopsis Description

PLP1Patatin [Source:UniProtKB/TrEMBL;Acc:A0A178UVZ8]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.