CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68587	Canola	nucleus	98.16	95.99
AT4G29800.2	Thale cress	cytosol	92.83	86.12
VIT_13s0019g04200.t01	Wine grape	cytosol	60.04	63.97
KRH34879	Soybean	cytosol	58.4	61.56
Solyc05g056030.2.1	Tomato	cytosol	58.4	61.16
PGSC0003DMT400060317	Potato	cytosol	57.99	60.73
CDX74862	Canola	cytosol	55.33	60.13
CDX67618	Canola	mitochondrion	56.76	59.44
CDY07512	Canola	mitochondrion	57.58	59.16
CDY56960	Canola	mitochondrion	57.17	57.41
CDX73423	Canola	mitochondrion	57.58	57.23
CDY07662	Canola	cytosol	55.53	56.93
CDY24974	Canola	cytosol	55.53	56.93
CDY44633	Canola	cytosol	56.35	56.58
GSMUA_Achr2P12330_001	Banana	cytosol	45.7	55.75
GSMUA_Achr8P18860_001	Banana	cytosol	37.09	54.52
GSMUA_Achr5P18500_001	Banana	cytosol	43.03	54.12
GSMUA_Achr5P03830_001	Banana	cytosol	47.95	53.92
KRG91895	Soybean	cytosol, extracellular, mitochondrion, plastid	59.02	52.94
TraesCS4B01G221000.1	Wheat	cytosol	47.75	50.65
TraesCS4D01G221300.1	Wheat	cytosol	47.54	50.54
TraesCS4A01G083200.1	Wheat	cytosol	47.75	50.43
EER95163	Sorghum	cytosol	46.52	49.35
Zm00001d028482_P001	Maize	cytosol	46.31	49.13
Os03t0254400-01	Rice	cytosol	46.72	48.61
GSMUA_Achr11P...	Banana	mitochondrion	28.69	48.61
CDY56455	Canola	cytosol	32.58	43.44
HORVU0Hr1G008670.3	Barley	cytosol	34.63	41.83
CDX93922	Canola	cytosol	32.99	41.6
CDX89181	Canola	cytosol	32.99	41.6
CDX76689	Canola	cytosol	32.79	41.56
CDX72619	Canola	cytosol	21.93	26.23
CDX75619	Canola	cytosol	21.93	26.23
CDX69270	Canola	cytosol, peroxisome, plastid	21.72	26.17
CDX75620	Canola	cytosol, peroxisome, plastid	21.72	26.17
CDX75621	Canola	cytosol	21.52	25.8
CDX69269	Canola	cytosol	21.93	25.78
CDX72620	Canola	cytosol	21.52	25.49
CDY42720	Canola	cytosol	21.52	25.42
CDY21469	Canola	cytosol, peroxisome, vacuole	21.11	25.31
CDX83197	Canola	cytosol	20.7	24.82
CDX69271	Canola	cytosol	20.7	24.82
CDY42719	Canola	cytosol	21.31	14.61

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.4	GO:A0A078I166	UniProt:A0A078I166	InterPro:Acyl_Trfase/lysoPLipase	EnsemblPlants:CDY43526
ProteinID:CDY43526	ProteinID:CDY43526.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0016042	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00076812001	InterPro:IPR002641
PFAM:PF01734	InterPro:PNPLA_dom	PFscan:PS51635	PANTHER:PTHR32241	SUPFAM:SSF52151	UniParc:UPI0004EDD0FD
SEG:seg	:	:	:	:	:

Description

BnaA01g07180DPatatin [Source:UniProtKB/TrEMBL;Acc:A0A078I166]

Coordinates

chrLK032560:-:128276..129952

Molecular Weight (calculated)

53110.1 Da

IEP (calculated)

9.588

GRAVY (calculated)

-0.378

Length

488 amino acids

Sequence
(BLAST)

001: MYRRYDKPPP LAVTSKENKK KKHFVNHTAP NTPGNHERTQ ASPTLSTARS HEPFIDSSDG KLSYEIFSIL ESKFLFGYED PRLSWIPRSP PRGRICVLSI
101: DGGGMRGLLA GKSLIYLEQM LKEKSGDPNA RIADYFDVAA GSGIGGVFSA MMFATRDGNR PMFKAEDTWK SAGGGGGGGA GAAIKRVIRS GSSSSSSVTA
201: ATAKLEKAMK ASFADLTLKD TLKPILISCY DLSSTAPLLF SRADALESDS FDFRLRDICR ATWAEPGTFD PVRASSVDGK TRCVAVGGGL AMSNPTAAAI
301: THVFHNKQEF PAVKGVEDML VLSLGTGQLF EVNYDYEQVK NWRVKEWARP MARISGDGSA EFVDQAVAMG FGPYRSSNYV RIQQANGSRL GACGPNVDTD
401: PRAENVKKLT EIADEMLKQN NVESVLFGSK RIGEMSNSDK LEWFASELVI EQQRRNVSAS PTVTLKQAVS KTNRNAINAT LTLISKER

Best Arabidopsis Sequence Match ( AT4G29800.2 )
(BLAST)

001: MNRRYEKPPP LSVSSKGKKK HFVNHTAPNT PGNYERTQTS PTLSTARSHE PDDKLNYEIF SILESKFLFG YEDPRLLWIP QSPLRPGDSE AGPSPRSPLT
101: PNGVVLPGTP SSSFRSPRGR ICVLSIDGGG MRGLLAGKSL IYLEQMLKEK SGDPNARIAD YFDVAAGSGV GGVFAAMIFA TRDGNRPIFK AEDTWKFLVE
201: NAEGFYRSGS GSGGGGAGAA IKRVIRSGSG SGSSSVTAAT AKLEKAMKAS FADLTLKDTL KPILISCYDL SSTAPFLFSR ADALESDSFD FRLRDICRAT
301: WAEPGTFDPV RTCSVDGKTR CVAVGGGLAM SNPTAAAITH VFHNKQEFPA VKGVEDLLVL SLGTGQLFEV NYDYEQVKNW RVKEWARPMA RISGDGSAEF
401: VDQAVAMGFG PYRSSNYVRI QQANGSRLGA CGPNVDTDPR AENVKKLTEI ADEMLKQNNV ESVLFGSKRI GEMSNSEKIE WFASELVIEQ QRRSVRASPT
501: VTLKQAVSKT NRNAINATLT LISKDR

Arabidopsis Description

PLP8PATATIN-like protein 8 [Source:TAIR;Acc:AT4G29800]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.