CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56960	Canola	mitochondrion	95.72	96.71
CDX67618	Canola	mitochondrion	86.76	91.42
CDY07512	Canola	mitochondrion	87.58	90.53
AT3G54950.1	Thale cress	mitochondrion	86.97	87.5
CDY07662	Canola	cytosol	74.75	77.1
CDY24974	Canola	cytosol	74.54	76.89
CDX74862	Canola	cytosol	70.26	76.84
CDY44633	Canola	cytosol	75.15	75.93
VIT_13s0019g04200.t01	Wine grape	cytosol	65.17	69.87
KRH34879	Soybean	cytosol	64.36	68.25
Solyc05g056030.2.1	Tomato	cytosol	62.12	65.45
PGSC0003DMT400060317	Potato	cytosol	61.91	65.24
GSMUA_Achr2P12330_001	Banana	cytosol	49.49	60.75
GSMUA_Achr5P18500_001	Banana	cytosol	47.86	60.57
GSMUA_Achr5P03830_001	Banana	cytosol	51.93	58.76
KRG91895	Soybean	cytosol, extracellular, mitochondrion, plastid	64.56	58.27
GSMUA_Achr8P18860_001	Banana	cytosol	39.1	57.83
CDY43526	Canola	nucleus	57.23	57.58
CDX68587	Canola	nucleus	58.25	57.31
GSMUA_Achr11P...	Banana	mitochondrion	32.59	55.56
EER95163	Sorghum	cytosol	50.51	53.91
TraesCS4D01G221300.1	Wheat	cytosol	49.49	52.94
Zm00001d028482_P001	Maize	cytosol	49.49	52.83
TraesCS4B01G221000.1	Wheat	cytosol	49.29	52.61
TraesCS4A01G083200.1	Wheat	cytosol	49.08	52.16
Os03t0254400-01	Rice	cytosol	49.08	51.39
CDY56455	Canola	cytosol	33.2	44.54
CDX89181	Canola	cytosol	33.81	42.89
CDX76689	Canola	cytosol	33.6	42.86
HORVU0Hr1G008670.3	Barley	cytosol	35.03	42.57
CDX93922	Canola	cytosol	33.4	42.38
CDY42720	Canola	cytosol	23.22	27.6
CDX72620	Canola	cytosol	23.01	27.43
CDX75619	Canola	cytosol	22.61	27.21
CDX75620	Canola	cytosol, peroxisome, plastid	22.4	27.16
CDX69270	Canola	cytosol, peroxisome, plastid	22.4	27.16
CDX75621	Canola	cytosol	22.4	27.03
CDX69271	Canola	cytosol	22.4	27.03
CDX72619	Canola	cytosol	22.4	26.96
CDY21469	Canola	cytosol, peroxisome, vacuole	22.2	26.78
CDX69269	Canola	cytosol	22.61	26.75
CDX83197	Canola	cytosol	21.79	26.29
CDY42719	Canola	cytosol	21.79	15.03

Protein Annotations

EnsemblPlants:CDX73423	EnsemblPlantsGene:GSBRNA2T00108920001	Gene3D:3.40.1090.10	GO:A0A078CEQ9	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	InterPro:Acyl_Trfase/lysoPLipase	InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32241	PFAM:PF01734
PFscan:PS51635	ProteinID:CDX73423	ProteinID:CDX73423.1	SEG:seg	SUPFAM:SSF52151	UniParc:UPI0004EE24DE
MapMan:5.7.2.2.4	:	:	:	:	:

Description

BnaC08g25800D

Coordinates

chrLK031799:+:288955..291180

Molecular Weight (calculated)

53524.7 Da

IEP (calculated)

8.123

GRAVY (calculated)

-0.346

Length

491 amino acids

Sequence
(BLAST)

001: MQRVRNKPSG GRTTTASVKH LIKQRGGDTE AASVDDNSLL TDMQEPSVDT DKLSYEIFSI LESKFLFGYD QDPKPEPEPV NSVVDSVPGS VKNQRGKVCI
101: LSIDGGGMRG IIPGKALAYL EHALKSKSGD PNARIADFFD VAAGSGVGGI FTAMLFGSRD GDRPIFRAED TWQFLTKNAK GLYGSSGSNS SLMKRVMRTG
201: SSGSGTAKLK RVMKESFSEL TLKDTLKPVL IPCYDLKSSA PFLFSRADAL ETDGYDFRLW EVCRATWAEP GVFEPVEMKS VDGKTKCVAI GGGLAMSNPT
301: AAAITHVLHN KQEFPFVRGV EDLLVLSLGM GQLLDVSYEY DRIIKWTAKH WSRPAALISN DGAADTVDQA VAMAFGHCRS SNYVRIQANG SSLGPCKPNI
401: DADPSGSNVN MLVGVAEEML KQKNVESVLF GGKRIDEQSN FEKLDWLAGE LVLEHQRRNS RIAPTVAFKQ SVHRADQKTR DKDIGVTARE R

Best Arabidopsis Sequence Match ( AT3G54950.1 )
(BLAST)

001: MHRVRNKPVK STATASVKHL IKQRGGDGAT AASKSANDYN NNDSLLTDMQ EPSIDTDKLS YEIFSILESK FLFGYDDSKP EPANSVVAGS IKNQRGKICI
101: LSIDGGGMRG ILPGKALAYL EHALKSKSGD PNARIADYFD VAAGSGIGGI YTAMLFGSRD GNRPIFKADD TWQFLTRNAK GLYGGAGILK RVLRTGSGCC
201: SGTAKLKKVM KESFSELTLK DTLKPVLIPC YDLKSSGPFL FSRADALETD GYDFRLSEVC RATWAEPGVF EPVEMKSVDG QTKCVAVGGG LAMSNPTAAA
301: ITHVLHNKQE FPFVRGVEDL LVLSLGMGQL LDVSYEYDRI IKWKAKHWAR PAALISNDGA ADTVDQAVAM AFGHCRSSNY VRIQANGSNL GPWSPNMDTD
401: PSGSNVNMLM GVAEEMLKQK NVESVLFGGK RIDEQSNFEK LDWLAGELVL EHQRRNSRIA PTVAFKQSVH RADQKTSDKD IGVTARER

Arabidopsis Description

PLP7Patatin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV43]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.