Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 2
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017798.1-P | Field mustard | cytosol | 56.32 | 98.28 |
| CDX72619 | Canola | cytosol | 55.62 | 97.06 |
| CDX75619 | Canola | cytosol | 48.88 | 85.29 |
| CDX69269 | Canola | cytosol | 48.74 | 83.61 |
| CDX75620 | Canola | cytosol, peroxisome, plastid | 47.05 | 82.72 |
| AT4G37070.2 | Thale cress | cytosol, peroxisome, plastid | 48.03 | 82.61 |
| CDX69270 | Canola | cytosol, peroxisome, plastid | 46.77 | 82.22 |
| AT4G37060.2 | Thale cress | cytosol, golgi, plastid | 45.65 | 73.03 |
| KRH28482 | Soybean | cytosol | 33.29 | 58.81 |
| VIT_07s0031g00860.t01 | Wine grape | cytosol | 33.57 | 58.58 |
| CDX72620 | Canola | cytosol | 33.71 | 58.25 |
| CDY42720 | Canola | cytosol | 33.01 | 56.9 |
| VIT_07s0031g00870.t01 | Wine grape | cytosol | 32.44 | 56.76 |
| PGSC0003DMT400040781 | Potato | cytosol | 31.74 | 56.64 |
| CDX75621 | Canola | cytosol | 32.16 | 56.27 |
| CDX69271 | Canola | cytosol | 32.16 | 56.27 |
| Solyc02g090630.2.1 | Tomato | cytosol | 30.76 | 55.44 |
| VIT_07s0031g00850.t01 | Wine grape | cytosol, peroxisome, plastid | 31.18 | 55.22 |
| CDX83197 | Canola | cytosol | 29.49 | 51.6 |
| CDY21469 | Canola | cytosol, peroxisome, vacuole | 29.49 | 51.6 |
| GSMUA_Achr3P06850_001 | Banana | cytosol | 29.49 | 51.47 |
| CDX89181 | Canola | cytosol | 13.2 | 24.29 |
| CDX74862 | Canola | cytosol | 15.31 | 24.28 |
| CDX93922 | Canola | cytosol | 13.06 | 24.03 |
| CDX76689 | Canola | cytosol | 12.92 | 23.9 |
| CDY56455 | Canola | cytosol | 12.22 | 23.77 |
| CDY07662 | Canola | cytosol | 15.87 | 23.74 |
| CDY24974 | Canola | cytosol | 15.87 | 23.74 |
| CDY44633 | Canola | cytosol | 15.87 | 23.25 |
| CDX67618 | Canola | mitochondrion | 14.61 | 22.32 |
| CDY56960 | Canola | mitochondrion | 14.89 | 21.81 |
| CDX73423 | Canola | mitochondrion | 15.03 | 21.79 |
| CDY43526 | Canola | nucleus | 14.61 | 21.31 |
| CDY07512 | Canola | mitochondrion | 14.19 | 21.26 |
| CDX68587 | Canola | nucleus | 14.75 | 21.04 |
Protein Annotations
| Gene3D:3.40.1090.10 | MapMan:5.7.2.2.3 | GO:A0A078HZD7 | UniProt:A0A078HZD7 | InterPro:Acyl_Trfase/lysoPLipase | EnsemblPlants:CDY42719 |
| ProteinID:CDY42719 | ProteinID:CDY42719.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006629 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016042 |
| GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00075257001 | InterPro:IPR002641 | PFAM:PF01734 | InterPro:PNPLA_dom | PFscan:PS51635 |
| PANTHER:PTHR32176 | PANTHER:PTHR32176:SF6 | SUPFAM:SSF52151 | TMHMM:TMhelix | UniParc:UPI0004EED9F2 | SEG:seg |
Description
BnaA03g53720DPatatin [Source:UniProtKB/TrEMBL;Acc:A0A078HZD7]
Coordinates
chrLK032532:+:227849..234009
Molecular Weight (calculated)
77090.8 Da
IEP (calculated)
8.232
GRAVY (calculated)
0.007
Length
712 amino acids
Sequence
(BLAST)
(BLAST)
001: MANDSSCKRN KPPSCCGSLV TILSLDGGGI RGTISGVILA CLEKQLQEID GEDVRLADYF DVVSGTSTGG LMTAMLTVPG KNGRPQLAAK DIVPFYLEHC
101: PKIFPQPEGL GALLPKLPKL LSGPKYSGKY LRKLLSKLLG ETKLHQTVTN VVIPTFDMKK LQPTIFSSYQ ALIDPSLDVK ISDICLGTSA APTFFPPHYF
201: SNEDSQGKTT EFNLVDGAVT ANNPVMSGAA VNNPIVWIIR GCSHVRTRLP RRLRGVVVAT GLLQLRTTPC TMAKNTTNLA LALISTQVGV LLLPCVVVVA
301: AIVVAVVVPT IPRVVTPVCG SLVTILSLDG GGIRGTISGV ILACLEKQLQ EIDGEDVRLA DYFDVVAGTS TGGLITAMLT VPDATGRPHF AAKDIVPFYL
401: EHCPKIFPQP EGVAALLPKL PKLLSGPKYD GKYLRNLLSN LLGETKLHQT ITNVVIPTFD MKKLQPTIFS SYQALFDPSL DVKLSDICIG TSAAPTFFPP
501: HYFSNKDSQG KTSEFHLVDG GVTASNPTLV AMTAVTKQIV KNNPDMGKLK PLGYDKFLVI SIGTGSTKKV EKYSAKKAAK WGIISWLYDD GSTPILDITM
601: ESSRDMIHFH SSVLFKALQS EDKYLRIDDD TLDNDAGSTD VATKSNLENL VKIGEKVLKN RVVHMNIDTG AYEPIPENVT NEEELKRFAK ILSEEQKLRR
701: MSSDTMTKDP TN
101: PKIFPQPEGL GALLPKLPKL LSGPKYSGKY LRKLLSKLLG ETKLHQTVTN VVIPTFDMKK LQPTIFSSYQ ALIDPSLDVK ISDICLGTSA APTFFPPHYF
201: SNEDSQGKTT EFNLVDGAVT ANNPVMSGAA VNNPIVWIIR GCSHVRTRLP RRLRGVVVAT GLLQLRTTPC TMAKNTTNLA LALISTQVGV LLLPCVVVVA
301: AIVVAVVVPT IPRVVTPVCG SLVTILSLDG GGIRGTISGV ILACLEKQLQ EIDGEDVRLA DYFDVVAGTS TGGLITAMLT VPDATGRPHF AAKDIVPFYL
401: EHCPKIFPQP EGVAALLPKL PKLLSGPKYD GKYLRNLLSN LLGETKLHQT ITNVVIPTFD MKKLQPTIFS SYQALFDPSL DVKLSDICIG TSAAPTFFPP
501: HYFSNKDSQG KTSEFHLVDG GVTASNPTLV AMTAVTKQIV KNNPDMGKLK PLGYDKFLVI SIGTGSTKKV EKYSAKKAAK WGIISWLYDD GSTPILDITM
601: ESSRDMIHFH SSVLFKALQS EDKYLRIDDD TLDNDAGSTD VATKSNLENL VKIGEKVLKN RVVHMNIDTG AYEPIPENVT NEEELKRFAK ILSEEQKLRR
701: MSSDTMTKDP TN
001: MENKSPSKKN KPPSCGSLVT ILSLDGGGVR GIIAGVILAF LEKQLQELDG EEARLADYFD VIAGTSTGGL VTAMLTVPDE TGRPHFAAKD IVPFYLEHCP
101: KIFPQPTGVL ALLPKLPKLL SGPKYSGKYL RNLLSKLLGE TRLHQTLTNI VIPTFDIKKL QPTIFSSYQL LVDPSLDVKV SDICIGTSAA PTFFPPHYFS
201: NEDSQGNKTE FNLVDGAVTA NNPTLVAMTA VSKQIVKNNP DMGKLKPLGF DRFLVISIGT GSTKREEKYS AKKAAKWGII SWLYDDGSTP ILDITMESSR
301: DMIHYHSSVV FKALQSEDKY LRIDDDTLEG DVSTMDLATK SNLENLQKIG EKMLTNRVMQ MNIDTGVYEP VAENITNDEQ LKRYAKILSD ERKLRRLRSD
401: TMIKDSSNES QEIK
101: KIFPQPTGVL ALLPKLPKLL SGPKYSGKYL RNLLSKLLGE TRLHQTLTNI VIPTFDIKKL QPTIFSSYQL LVDPSLDVKV SDICIGTSAA PTFFPPHYFS
201: NEDSQGNKTE FNLVDGAVTA NNPTLVAMTA VSKQIVKNNP DMGKLKPLGF DRFLVISIGT GSTKREEKYS AKKAAKWGII SWLYDDGSTP ILDITMESSR
301: DMIHYHSSVV FKALQSEDKY LRIDDDTLEG DVSTMDLATK SNLENLQKIG EKMLTNRVMQ MNIDTGVYEP VAENITNDEQ LKRYAKILSD ERKLRRLRSD
401: TMIKDSSNES QEIK
Arabidopsis Description
PLP1Patatin [Source:UniProtKB/TrEMBL;Acc:A0A178UVZ8]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.