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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, plastid, cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • plasma membrane 1
  • vacuole 1
  • mitochondrion 1
  • plastid 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, golgi, plastid
Any Predictor:cytosol, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane, vacuole
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT4G37070.2 Thale cress cytosol, peroxisome, plastid 80.22 86.23
Bra011730.1-P Field mustard cytosol 73.48 80.15
CDX75619 Canola cytosol 73.26 79.9
CDX72619 Canola cytosol 73.26 79.9
Bra017798.1-P Field mustard cytosol 72.81 79.41
CDX69269 Canola cytosol 73.48 78.8
CDX75620 Canola cytosol, peroxisome, plastid 71.46 78.52
Bra011731.1-P Field mustard cytosol, peroxisome, plastid 71.46 78.52
CDX69270 Canola cytosol, peroxisome, plastid 71.24 78.27
KRH28482 Soybean cytosol 52.58 58.06
Solyc02g090630.2.1 Tomato cytosol 50.34 56.71
PGSC0003DMT400040781 Potato cytosol 50.56 56.39
VIT_07s0031g00870.t01 Wine grape cytosol 51.46 56.27
AT4G37050.1 Thale cress cytosol 53.93 56.07
AT5G43590.2 Thale cress mitochondrion 58.88 55.98
VIT_07s0031g00860.t01 Wine grape cytosol 51.24 55.88
VIT_07s0031g00850.t01 Wine grape cytosol, peroxisome, plastid 48.76 53.98
AT2G26560.1 Thale cress cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 48.31 52.83
GSMUA_Achr3P06850_001 Banana cytosol 47.64 51.96
CDY42719 Canola cytosol 73.03 45.65
AT3G63200.1 Thale cress cytosol 22.47 26.04
AT2G39220.1 Thale cress cytosol 25.84 23.05
AT3G54950.1 Thale cress mitochondrion 25.17 22.95
AT4G29800.2 Thale cress cytosol 24.94 21.1
Protein Annotations
MapMan:5.7.2.2.3EntrezGene:829860ProteinID:AEE86743.2ArrayExpress:AT4G37060EnsemblPlantsGene:AT4G37060RefSeq:AT4G37060
TAIR:AT4G37060RefSeq:AT4G37060-TAIR-GEnsemblPlants:AT4G37060.2TAIR:AT4G37060.2InterPro:Acyl_Trfase/lysoPLipaseUnigene:At.54637
UniProt:F4JR91GO:GO:0003674GO:GO:0003824GO:GO:0004620GO:GO:0006629GO:GO:0008150
GO:GO:0008152GO:GO:0009056GO:GO:0016042GO:GO:0016787InterPro:IPR002641RefSeq:NP_001190942.2
PFAM:PF01734Symbol:PLP5InterPro:PNPLA_domPO:PO:0009005PO:PO:0009025PO:PO:0020030
PFscan:PS51635PANTHER:PTHR32176PANTHER:PTHR32176:SF6SUPFAM:SSF52151UniParc:UPI0008496643SEG:seg
Description
PLP5PATATIN-like protein 5 [Source:TAIR;Acc:AT4G37060]
Coordinates
chr4:-:17461366..17463734
Molecular Weight (calculated)
49403.3 Da
IEP (calculated)
7.129
GRAVY (calculated)
-0.273
Length
445 amino acids
Sequence
(BLAST)
001: MENESPSKKN MPPSCGTLVT ILSLDGGGVR GIIAGVILAY LEKQLQVYIY INFSRMQVTK IVDTYDRIIT RHANFVVELD GEHVRVADYF DVIAGTSTGG
101: LVTAMLTAPD ENGRPRFAAK EIVPFYLEHC PKIFPQPTGV LALLPKLPKL LSGPKYSGNY LRTTLGKLLG ETKLRQTLTN VVIPTFDIKT LQPTIFSSYQ
201: ALTDPSLDVK VSDICIGTSA APTYFPPYYF SNEDSQGKTR HFNLVDGGVT ANNPTLVAMT AVTKQIVNNN PDMGTLNPLG YDQFLVISIG TGSAKKEERY
301: SAKKAAKWGI ISWLYEDGTT PILDITFESS RDIVHYHSSV VFKALQSEDK YLRIDDDTLE GDASTLDLST KSNLENLIKL GEKMLTNRVM QMNIDTGTYE
401: PAAENINNDE QLKRFAKILS EERKLRRKRS DKMTKDSSIG SQEIK
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.