Factsheet for Bra011731.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
vacuole 2
mitochondrion 2
cytosol 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75620	Canola	cytosol, peroxisome, plastid	100.0	100.0
Bra017798.1-P	Field mustard	cytosol	82.72	82.11
Bra011730.1-P	Field mustard	cytosol	80.25	79.66
AT4G37070.2	Thale cress	cytosol, peroxisome, plastid	80.74	78.99
AT4G37060.2	Thale cress	cytosol, golgi, plastid	78.52	71.46
Bra017799.1-P	Field mustard	cytosol	59.26	58.25
VIT_07s0031g00860.t01	Wine grape	cytosol	58.52	58.09
KRH28482	Soybean	cytosol	57.04	57.32
PGSC0003DMT400040781	Potato	cytosol	54.81	55.64
VIT_07s0031g00870.t01	Wine grape	cytosol	55.8	55.53
VIT_07s0031g00850.t01	Wine grape	cytosol, peroxisome, plastid	54.57	54.98
Solyc02g090630.2.1	Tomato	cytosol	53.58	54.94
Bra011732.1-P	Field mustard	cytosol	51.36	54.45
GSMUA_Achr3P06850_001	Banana	cytosol	51.6	51.23
Bra000578.1-P	Field mustard	cytosol	50.37	50.37
Bra040428.1-P	Field mustard	cytosol	23.46	24.55
Bra005058.1-P	Field mustard	cytosol	28.64	23.82
Bra007735.1-P	Field mustard	cytosol	22.47	23.64
Bra000125.1-P	Field mustard	cytosol	28.15	23.6
Bra003202.1-P	Field mustard	mitochondrion	26.91	22.9
Bra007119.1-P	Field mustard	mitochondrion	27.16	22.18

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.3	InterPro:Acyl_Trfase/lysoPLipase	EnsemblPlantsGene:Bra011731	EnsemblPlants:Bra011731.1	EnsemblPlants:Bra011731.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0016042	GO:GO:0016787	InterPro:IPR002641	UniProt:M4D5H4	PFAM:PF01734	InterPro:PNPLA_dom
PFscan:PS51635	PANTHER:PTHR32176	PANTHER:PTHR32176:SF6	SUPFAM:SSF52151	UniParc:UPI00025467E4	SEG:seg

Description

AT4G37070 (E=2e-171) PLP1, PLA IVA | patatin, putative

Coordinates

chrA01:-:841146..843506

Molecular Weight (calculated)

44477.6 Da

IEP (calculated)

6.891

GRAVY (calculated)

-0.207

Length

405 amino acids

Sequence
(BLAST)

001: MHSSCKKNKP PSRGSLVTIL SLDGGGVRGI MVGVILAYLE EQLQALDGED MRLADYFDVV AGTSTGGLMT AMLTVPDETG RPRFAAKDIV PFYLQHSPKI
101: FPQPGGLAAL LPKLPKLLSG PKYDGVYLRN LLNNLLGETR LHQTITNVVI PTFDMKKLQP TIFSSYQALV DPSLDVKISD ICIGTSAAPT YFPPHYFQNE
201: DIQGKTSEFH LVDGGVTANN PTLLAMTAVT KQIVNDNPDM GELKPLGYNK FLVVSIGTGS AQKAKKYSAR EAAKWGIISW LYDNGSTPIL DITMESSRDI
301: VDFHSSVVFK ARQSEDKYLR IDDDTLKGDA SSMDLATKSN LENLVIIGEK MLKNRVVQMN IDTGVYEPVP GNVTNDQELK RFAKILSDER KLRMQSDAMH
401: KVSSS

Best Arabidopsis Sequence Match ( AT4G37070.2 )
(BLAST)

001: MENKSPSKKN KPPSCGSLVT ILSLDGGGVR GIIAGVILAF LEKQLQELDG EEARLADYFD VIAGTSTGGL VTAMLTVPDE TGRPHFAAKD IVPFYLEHCP
101: KIFPQPTGVL ALLPKLPKLL SGPKYSGKYL RNLLSKLLGE TRLHQTLTNI VIPTFDIKKL QPTIFSSYQL LVDPSLDVKV SDICIGTSAA PTFFPPHYFS
201: NEDSQGNKTE FNLVDGAVTA NNPTLVAMTA VSKQIVKNNP DMGKLKPLGF DRFLVISIGT GSTKREEKYS AKKAAKWGII SWLYDDGSTP ILDITMESSR
301: DMIHYHSSVV FKALQSEDKY LRIDDDTLEG DVSTMDLATK SNLENLQKIG EKMLTNRVMQ MNIDTGVYEP VAENITNDEQ LKRYAKILSD ERKLRRLRSD
401: TMIKDSSNES QEIK

Arabidopsis Description

PLP1Patatin [Source:UniProtKB/TrEMBL;Acc:A0A178UVZ8]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.