Factsheet for PGSC0003DMT400040781

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
vacuole 2
mitochondrion 2
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g090630.2.1	Tomato	cytosol	87.22	88.1
VIT_07s0031g00860.t01	Wine grape	cytosol	66.42	64.95
KRH28482	Soybean	cytosol	64.91	64.27
VIT_07s0031g00870.t01	Wine grape	cytosol	64.66	63.39
VIT_07s0031g00850.t01	Wine grape	cytosol, peroxisome, plastid	63.16	62.69
Bra017799.1-P	Field mustard	cytosol	61.4	59.47
CDX72620	Canola	cytosol	61.4	59.47
CDY42720	Canola	cytosol	59.65	57.63
PGSC0003DMT400044057	Potato	cytosol	13.78	57.29
CDX69271	Canola	cytosol	58.4	57.25
CDX75621	Canola	cytosol	58.4	57.25
AT4G37070.2	Thale cress	cytosol, peroxisome, plastid	59.15	57.0
Bra011730.1-P	Field mustard	cytosol	57.64	56.37
CDX75619	Canola	cytosol	57.64	56.37
GSMUA_Achr3P06850_001	Banana	cytosol	57.64	56.37
Bra011732.1-P	Field mustard	cytosol	53.63	56.02
CDX72619	Canola	cytosol	56.89	55.64
AT4G37050.1	Thale cress	cytosol	59.4	55.37
Bra017798.1-P	Field mustard	cytosol	56.39	55.15
Bra011731.1-P	Field mustard	cytosol, peroxisome, plastid	55.64	54.81
CDX69270	Canola	cytosol, peroxisome, plastid	55.64	54.81
CDX75620	Canola	cytosol, peroxisome, plastid	55.64	54.81
CDX69269	Canola	cytosol	56.89	54.7
PGSC0003DMT400025955	Potato	extracellular	54.39	52.67
PGSC0003DMT400040802	Potato	mitochondrion	19.3	51.33
PGSC0003DMT400058995	Potato	cytosol	20.3	50.62
AT4G37060.2	Thale cress	cytosol, golgi, plastid	56.39	50.56
PGSC0003DMT400002019	Potato	golgi, vacuole	52.38	49.76
PGSC0003DMT400044046	Potato	cytosol	32.83	47.64
PGSC0003DMT400022567	Potato	extracellular	41.35	47.41
PGSC0003DMT400002016	Potato	cytosol	30.58	47.29
PGSC0003DMT400044055	Potato	cytosol	42.11	46.15
AT5G43590.2	Thale cress	mitochondrion	50.88	43.38
PGSC0003DMT400036586	Potato	cytosol	24.31	41.81
CDY42719	Canola	cytosol	56.64	31.74
PGSC0003DMT400060317	Potato	cytosol	28.82	24.68
PGSC0003DMT400051868	Potato	cytosol	23.06	24.08
PGSC0003DMT400033524	Potato	cytosol	21.8	22.96
PGSC0003DMT400060932	Potato	cytosol	24.06	22.38
PGSC0003DMT400021555	Potato	cytosol	24.06	22.07

Protein Annotations

EntrezGene:102598099	Gene3D:3.40.1090.10	MapMan:5.7.2.2.3	InterPro:Acyl_Trfase/lysoPLipase	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0006629
GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016042
GO:GO:0016787	GO:GO:0045735	InterPro:IPR002641	UniProt:M1BAE4	PFAM:PF01734	EnsemblPlantsGene:PGSC0003DMG400015769
PGSC:PGSC0003DMG400015769	EnsemblPlants:PGSC0003DMT400040781	InterPro:PNPLA_dom	PFscan:PS51635	PANTHER:PTHR32176	PANTHER:PTHR32176:SF6
SUPFAM:SSF52151	UniParc:UPI000296CEC1	RefSeq:XP_006339912.1	SEG:seg	:	:

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400015769]

Coordinates

chr2:-:44019803..44021739

Molecular Weight (calculated)

43466.2 Da

IEP (calculated)

6.807

GRAVY (calculated)

-0.202

Length

399 amino acids

Sequence
(BLAST)

001: MENKAAGRVA MPPPTTGKLI TILSIDGGGI RGIIPGVILA YLESQLQELD GEDARIADYF DLIAGTSTGG LVTAMLAAPN KAKRPLYAAK DITPFYLEHS
101: PKIFHQTGGP FGGVINLTKM LNGPKYDGKY LHTLIKGLLG GTRLHDTLTA VVIPTFDIKE LQPVIFSSYE TKSKPVSDAE LADICISTSA APTFLPAHSF
201: KTKDAQNNEH EFNLIDGGVA ANNPTLIAIG EVTKQVLMKH EDLFPIKPME YGRFLVISLG TGNAKNEGKY NAKMAAKWGL LSWLTHDNST PIIEAFNQAS
301: ADMVDYHNFV VFKALQSDDQ YLRIQDDTLT GNLASVDIAT KENLEGLVKV GERLLDKPAS KINLDKGVYE AVENGGTNKE ALRRFAKTLS DERKFRQSK

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.