CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400040781	Potato	cytosol	64.27	64.91
VIT_07s0031g00860.t01	Wine grape	cytosol	64.76	63.97
Solyc02g090630.2.1	Tomato	cytosol	62.53	63.8
VIT_07s0031g00850.t01	Wine grape	cytosol, peroxisome, plastid	63.28	63.43
VIT_07s0031g00870.t01	Wine grape	cytosol	64.02	63.39
KRH61261	Soybean	cytosol, peroxisome, plastid	34.24	61.33
CDX72620	Canola	cytosol	62.03	60.68
Bra017799.1-P	Field mustard	cytosol	61.54	60.19
KRH05707	Soybean	cytosol	61.04	60.15
KRH05706	Soybean	cytosol, extracellular, nucleus	55.09	59.04
CDY42720	Canola	cytosol	60.3	58.84
KRH51959	Soybean	nucleus	60.3	58.7
KRH15336	Soybean	cytosol	59.31	58.58
CDX75621	Canola	cytosol	59.06	58.48
KRH15338	Soybean	cytosol	59.06	58.33
AT4G37050.1	Thale cress	cytosol	61.79	58.18
CDX72619	Canola	cytosol	58.81	58.09
KRH15334	Soybean	cytosol	58.81	58.09
CDX69271	Canola	cytosol	58.31	57.74
Bra017798.1-P	Field mustard	cytosol	58.31	57.6
AT4G37070.2	Thale cress	cytosol, peroxisome, plastid	58.81	57.25
KRH05709	Soybean	cytosol	57.82	57.11
Bra011730.1-P	Field mustard	cytosol	57.82	57.11
CDX75619	Canola	cytosol	57.82	57.11
Bra011731.1-P	Field mustard	cytosol, peroxisome, plastid	57.32	57.04
CDX69270	Canola	cytosol, peroxisome, plastid	57.32	57.04
CDX75620	Canola	cytosol, peroxisome, plastid	57.32	57.04
Bra011732.1-P	Field mustard	cytosol	53.85	56.81
KRH05708	Soybean	cytosol	52.61	56.23
GSMUA_Achr3P06850_001	Banana	cytosol	56.82	56.13
CDX69269	Canola	cytosol	57.32	55.66
AT4G37060.2	Thale cress	cytosol, golgi, plastid	58.06	52.58
KRH15337	Soybean	cytosol	20.84	50.91
AT5G43590.2	Thale cress	mitochondrion	51.36	44.23
KRH48830	Soybean	extracellular, vacuole	44.91	43.3
KRH48827	Soybean	cytosol, plastid	23.82	40.34
KRH48829	Soybean	endoplasmic reticulum, extracellular	39.95	39.56
CDY42719	Canola	cytosol	58.81	33.29
KRH32021	Soybean	cytosol	22.58	23.95
KRG95536	Soybean	cytosol	22.33	23.56
KRH71425	Soybean	cytosol	22.08	23.48
KRH34879	Soybean	cytosol	26.3	22.89
KRH36757	Soybean	cytosol	24.57	22.81
KRH11757	Soybean	cytosol	24.07	22.45
KRH67210	Soybean	cytosol	21.84	22.0
KRG91895	Soybean	cytosol, extracellular, mitochondrion, plastid	26.3	19.49

Protein Annotations

EntrezGene:100812523	Gene3D:3.40.1090.10	MapMan:5.7.2.2.3	EMBL:ACUP02006755	InterPro:Acyl_Trfase/lysoPLipase	EnsemblPlantsGene:GLYMA_11G056900
GO:GO:0003674	GO:GO:0003824	GO:GO:0004620	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009719
GO:GO:0009737	GO:GO:0016020	GO:GO:0016042	GO:GO:0016787	GO:GO:0047372	UniProt:I1LHF4
InterPro:IPR002641	EnsemblPlants:KRH28482	ProteinID:KRH28482	ProteinID:KRH28482.1	PFAM:PF01734	InterPro:PNPLA_dom
PFscan:PS51635	PANTHER:PTHR32176	PANTHER:PTHR32176:SF6	SUPFAM:SSF52151	UniParc:UPI000233CFE3	SEG:seg

Description

hypothetical protein

Coordinates

chr11:-:4298795..4300993

Molecular Weight (calculated)

44092.8 Da

IEP (calculated)

6.792

GRAVY (calculated)

-0.180

Length

403 amino acids

Sequence
(BLAST)

001: MENPSSPEAP APKYENLITV LSIDGGGIRG IIPGVILDYL ESQLQELDGE DARLADYFDV IAGTSTGGLV ASMLAAPNPK ANNRPLFAAN EIVPFYLENS
101: PQIFPQKRGG IFAPLVNIGK ALTGPKYDGK HFHELIRNKL GGTKLHQTLT NVVIPTFDVK ILQPTIFSSY QMAKEPTLDV LLSDICIATS AAPTFLPAHY
201: FTKQDEQGKV IKEFNLIDGS VAANNPTLCA IREVTKQLIR KGNGGISINP LEYSRFLVLS IGTGSNKSEH KYNAKMVSKW GILTWLFNSG STPILDCFSE
301: ASFDMVDYHN CVVFSALQSE DNYLRIQDNT LKGDLASVDV ATKENLDNLV KVGQQLLKNT VTRVNLDTGL YEPVPDKGTN VEALKRFAKL LSEARKGRKS
401: NSQ

Best Arabidopsis Sequence Match ( AT4G37050.1 )
(BLAST)

001: MDTERGSISS SEISRTAHLQ DRTVACLPPS YGQLVTILSI DGGGIRGIIP GTILAYLESQ LQELDGEEAR LVDYFDVISG TSTGGLIVAM LTAQDQSGGH
101: SRNSNRPLFE AKEIVPFYLK HSPKIFPQPR GIFCGWGETI VRLVGGPKFN GKYLHDLVEG FLGDTKLTQS LTNVVIPCFD IKKLQPVIFS SYQAVNNQAM
201: NAKLSDICIS TSAAPTFFPA HRFTNEDSEG IKHEFNLIDG GIAANNPTLC AIAEVTKQII KKNPVMGDIS PLDFTRFLVI SIGTGSIRNQ EKYNAKMASK
301: WGLMCWVFES GSTPILDCYS EAIHDMVDYQ SSVVFQALRS EKNYLRIDDD SLKGDLGSVD ISTEKNMEGL VEVGEALLKK RVSRVNLESG HYQPISENVT
401: NEEALKRFAK VLSEERKLRE SRSPKLKI

Arabidopsis Description

PLP3Patatin-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O23181]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.