CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
vacuole 2
plasma membrane 1
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH05706	Soybean	cytosol, extracellular, nucleus	85.57	93.09
KRH15336	Soybean	cytosol	92.42	92.65
KRH15337	Soybean	cytosol	35.45	87.88
KRH51959	Soybean	nucleus	83.13	82.13
KRH61261	Soybean	cytosol, peroxisome, plastid	43.52	79.11
VIT_18s0001g11010.t01	Wine grape	cytosol	70.17	70.69
VIT_18s0001g10880.t01	Wine grape	cytosol	69.93	70.44
Solyc04g079250.2.1	Tomato	cytosol	69.44	70.12
VIT_18s0001g10950.t01	Wine grape	cytosol, peroxisome, plastid	69.19	69.7
VIT_18s0001g10970.t01	Wine grape	cytosol, peroxisome, plastid	68.95	69.46
VIT_18s0001g10940.t01	Wine grape	cytosol, peroxisome, plastid	68.95	69.46
VIT_18s0001g10980.t01	Wine grape	cytosol, peroxisome, plastid	66.01	69.05
Solyc04g079260.2.1	Tomato	cytosol	68.22	68.72
Solyc04g079240.2.1	Tomato	nucleus	69.19	68.69
VIT_18s0001g10920.t01	Wine grape	extracellular	67.97	63.76
KRH28482	Soybean	cytosol	60.15	61.04
GSMUA_Achr3P06850_001	Banana	cytosol	60.64	60.78
KRH15338	Soybean	cytosol	60.15	60.29
KRH15334	Soybean	cytosol	59.9	60.05
KRH05709	Soybean	cytosol	59.66	59.8
KRH05708	Soybean	cytosol	53.79	58.36
KRH48830	Soybean	extracellular, vacuole	46.94	45.93
KRH48827	Soybean	cytosol, plastid	24.94	42.86
KRH48829	Soybean	endoplasmic reticulum, extracellular	40.34	40.54
KRG95536	Soybean	cytosol	22.25	23.82
KRH34879	Soybean	cytosol	26.89	23.76
KRH32021	Soybean	cytosol	22.0	23.68
KRH71425	Soybean	cytosol	21.76	23.48
KRH36757	Soybean	cytosol	24.45	23.04
KRH11757	Soybean	cytosol	24.21	22.92
KRH67210	Soybean	cytosol	22.0	22.5
KRG91895	Soybean	cytosol, extracellular, mitochondrion, plastid	26.65	20.04

Protein Annotations

EntrezGene:100798783	Gene3D:3.40.1090.10	MapMan:5.7.2.2.3	EMBL:ACUP02010773	InterPro:Acyl_Trfase/lysoPLipase	EnsemblPlantsGene:GLYMA_17G244000
GO:GO:0003674	GO:GO:0003824	GO:GO:0004620	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016020
GO:GO:0016042	GO:GO:0016787	GO:GO:0047372	UniProt:I1MXQ7	InterPro:IPR002641	EnsemblPlants:KRH05707
ProteinID:KRH05707	ProteinID:KRH05707.1	PFAM:PF01734	InterPro:PNPLA_dom	PFscan:PS51635	PANTHER:PTHR32176
PANTHER:PTHR32176:SF24	SUPFAM:SSF52151	UniParc:UPI000233E7BE	:	:	:

Description

hypothetical protein

Coordinates

chr17:+:39950253..39952972

Molecular Weight (calculated)

45086.0 Da

IEP (calculated)

6.803

GRAVY (calculated)

-0.281

Length

409 amino acids

Sequence
(BLAST)

001: MERAKSSIEQ IQPPTYGNLV TILSIDGGGI RGIIPATIID FLESQLQELD GPDARLADYF DVISGTSTGG LVTAMITAPD NNNRPLFAAK DIKPFYMDHS
101: PKIFPQHSGL GGTILAKVVK SLLGGPKYDG KYLHGVVREK LGDIRLHETL TNVVIPTFDI KSLQPIIFSS YQIKNSPSLD AKLSDICIST SAAPTYLPAH
201: NFNNQDSNGK VHEFNLIDGG VCANNPTLVA MNEVTKQIIK QNSDLFPIKP LEYGRFLIIS IGTGTAKNEE KFNAQMAAKW GLLDWLTQSG STPLIDVFTQ
301: SSADMVDFHL SAVTQALHSQ DNYLRIQDDT LTGTDSSVDI ATKENLEKLS QIGEKLLKKP VSRVNLENGL FEPLKNRETN EDALKRFAKI LSQERRLREM
401: KSPHTKKSF

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.