Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- vacuole 5
- extracellular 5
- endoplasmic reticulum 3
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_18s0001g10880.t01 | Wine grape | cytosol | 88.76 | 95.32 |
| VIT_18s0001g10940.t01 | Wine grape | cytosol, peroxisome, plastid | 81.65 | 87.68 |
| VIT_18s0001g10950.t01 | Wine grape | cytosol, peroxisome, plastid | 81.19 | 87.19 |
| VIT_18s0001g10970.t01 | Wine grape | cytosol, peroxisome, plastid | 80.96 | 86.95 |
| VIT_18s0001g11010.t01 | Wine grape | cytosol | 80.5 | 86.45 |
| VIT_18s0001g10980.t01 | Wine grape | cytosol, peroxisome, plastid | 75.0 | 83.63 |
| Solyc04g079240.2.1 | Tomato | nucleus | 64.68 | 68.45 |
| KRH51959 | Soybean | nucleus | 64.68 | 68.12 |
| KRH05707 | Soybean | cytosol | 63.76 | 67.97 |
| Solyc04g079250.2.1 | Tomato | cytosol | 63.07 | 67.9 |
| VIT_07s0031g00860.t01 | Wine grape | cytosol | 63.53 | 67.89 |
| KRH15336 | Soybean | cytosol | 63.3 | 67.65 |
| KRH05706 | Soybean | cytosol, extracellular, nucleus | 57.8 | 67.02 |
| Solyc04g079260.2.1 | Tomato | cytosol | 62.16 | 66.75 |
| VIT_18s0001g10850.t01 | Wine grape | cytosol | 62.16 | 65.62 |
| VIT_18s0001g10910.t01 | Wine grape | cytosol | 61.93 | 65.38 |
| VIT_18s0001g10870.t01 | Wine grape | cytosol | 61.93 | 65.38 |
| VIT_07s0031g00870.t01 | Wine grape | cytosol | 59.63 | 63.88 |
| VIT_07s0031g00850.t01 | Wine grape | cytosol, peroxisome, plastid | 58.49 | 63.43 |
| VIT_00s0567g00050.t01 | Wine grape | cytosol | 30.05 | 61.5 |
| VIT_18s0001g10930.t01 | Wine grape | cytosol | 43.12 | 60.06 |
| VIT_18s0001g10830.t01 | Wine grape | mitochondrion, plasma membrane, plastid | 62.61 | 59.35 |
| VIT_18s0001g10900.t01 | Wine grape | cytosol | 27.06 | 58.71 |
| VIT_00s0567g00060.t01 | Wine grape | cytosol | 49.77 | 58.02 |
| KRH15337 | Soybean | cytosol | 21.79 | 57.58 |
| GSMUA_Achr3P06850_001 | Banana | cytosol | 53.21 | 56.86 |
| VIT_00s0567g00040.t01 | Wine grape | cytosol | 17.43 | 46.91 |
| VIT_07s0005g01880.t01 | Wine grape | plastid | 36.47 | 41.84 |
| VIT_07s0005g01890.t01 | Wine grape | mitochondrion | 36.01 | 41.21 |
| VIT_07s0005g01860.t01 | Wine grape | cytosol | 35.55 | 40.79 |
| VIT_07s0005g01840.t01 | Wine grape | cytosol, mitochondrion, plastid | 36.47 | 37.5 |
| VIT_07s0151g01130.t01 | Wine grape | cytosol | 23.85 | 27.01 |
| VIT_13s0019g04200.t01 | Wine grape | cytosol | 27.98 | 26.64 |
| VIT_10s0092g00150.t01 | Wine grape | cytosol | 24.54 | 25.06 |
Protein Annotations
| Gene3D:3.40.1090.10 | MapMan:5.7.2.2.3 | InterPro:Acyl_Trfase/lysoPLipase | ProteinID:CBI19553 | ProteinID:CBI19553.3 | UniProt:E0CP96 |
| EMBL:FN595227 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004620 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0016020 | GO:GO:0016042 | GO:GO:0016787 | GO:GO:0047372 | InterPro:IPR002641 | PFAM:PF01734 |
| InterPro:PNPLA_dom | PFscan:PS51635 | PANTHER:PTHR32176 | PANTHER:PTHR32176:SF6 | SUPFAM:SSF52151 | UniParc:UPI0001BE13E1 |
| ArrayExpress:VIT_18s0001g10920 | EnsemblPlantsGene:VIT_18s0001g10920 | EnsemblPlants:VIT_18s0001g10920.t01 | : | : | : |
Description
Patatin [Source:UniProtKB/TrEMBL;Acc:E0CP96]
Coordinates
chr18:-:9238035..9246098
Molecular Weight (calculated)
48329.9 Da
IEP (calculated)
9.718
GRAVY (calculated)
-0.115
Length
436 amino acids
Sequence
(BLAST)
(BLAST)
001: MFVLMLEYTK ALIQSPSLIS FSIVLVKDKI GFLSCQIQAH TFEKKKMEKS LLPQIQPPTY GNLVTILSID GGGIRGIIPA TILACLESQL QELDGDDARI
101: ADYFDVIAGT STGGLVTAML TAPNDEKRPL FAAKDIKPFY LKHGPKIFPQ RRGIFGWIMN IFRSIVGPNY DGKYLHNLIK EKLGRTRLHQ TLTSVVIPTF
201: DIKSLQPSIF SSYEVKRSPS LDAPLADICI GSSAAPTYFP AYFFKNQDKE GKARELNLID GGVAANNPAL VAISQVTKQV FDKNPDFLPI KPMDYGRFLV
301: ISIGTGSPKS EQKYNAKMAA KWGVLGWLLH GGSTPLVDVF TQASADMVDF HISVVFQALH SEDNYLRIQE NLGNLVKIGE RLLKKPVSRV NLETGLSVPV
401: ENCGTNEEAL KRFAKLLSDE KRLRETRSPN PKKNLK
101: ADYFDVIAGT STGGLVTAML TAPNDEKRPL FAAKDIKPFY LKHGPKIFPQ RRGIFGWIMN IFRSIVGPNY DGKYLHNLIK EKLGRTRLHQ TLTSVVIPTF
201: DIKSLQPSIF SSYEVKRSPS LDAPLADICI GSSAAPTYFP AYFFKNQDKE GKARELNLID GGVAANNPAL VAISQVTKQV FDKNPDFLPI KPMDYGRFLV
301: ISIGTGSPKS EQKYNAKMAA KWGVLGWLLH GGSTPLVDVF TQASADMVDF HISVVFQALH SEDNYLRIQE NLGNLVKIGE RLLKKPVSRV NLETGLSVPV
401: ENCGTNEEAL KRFAKLLSDE KRLRETRSPN PKKNLK
001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI
Arabidopsis Description
PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.