Factsheet for VIT_00s0567g00040.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
vacuole 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400058995	Potato	cytosol	60.49	61.25
Os08t0376550-00	Rice	cytosol	45.06	40.33
PGSC0003DMT400002016	Potato	cytosol	58.02	36.43
VIT_00s0567g00060.t01	Wine grape	cytosol	70.99	30.75
TraesCS4A01G345400.1	Wheat	cytosol	36.42	27.57
TraesCS3D01G033600.1	Wheat	mitochondrion, peroxisome	47.53	25.5
PGSC0003DMT400025955	Potato	extracellular	62.35	24.51
Solyc03g044710.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	60.49	23.9
Solyc02g090490.2.1	Tomato	extracellular	60.49	23.79
Solyc02g065090.2.1	Tomato	nucleus	60.49	23.33
TraesCS6A01G142200.1	Wheat	cytosol	46.91	23.1
PGSC0003DMT400002019	Potato	golgi, vacuole	59.88	23.1
Solyc02g065100.1.1	Tomato	endoplasmic reticulum, extracellular	57.41	22.63
HORVU6Hr1G027900.2	Barley	cytosol	46.91	22.16
TraesCS3B01G036100.1	Wheat	cytosol	37.04	22.06
VIT_18s0001g10950.t01	Wine grape	cytosol, peroxisome, plastid	54.32	21.67
VIT_18s0001g11010.t01	Wine grape	cytosol	54.32	21.67
VIT_18s0001g10970.t01	Wine grape	cytosol, peroxisome, plastid	54.32	21.67
VIT_18s0001g10900.t01	Wine grape	cytosol	26.54	21.39
VIT_18s0001g10870.t01	Wine grape	cytosol	53.7	21.07
VIT_18s0001g10940.t01	Wine grape	cytosol, peroxisome, plastid	52.47	20.94
VIT_18s0001g10910.t01	Wine grape	cytosol	53.09	20.82
VIT_18s0001g10850.t01	Wine grape	cytosol	53.09	20.82
VIT_18s0001g10980.t01	Wine grape	cytosol, peroxisome, plastid	50.0	20.72
VIT_18s0001g10880.t01	Wine grape	cytosol	51.85	20.69
VIT_07s0031g00850.t01	Wine grape	cytosol, peroxisome, plastid	51.23	20.65
VIT_07s0031g00870.t01	Wine grape	cytosol	51.23	20.39
VIT_07s0031g00860.t01	Wine grape	cytosol	50.62	20.1
TraesCS4D01G285300.1	Wheat	plastid	52.47	19.63
TraesCS4A01G017400.1	Wheat	plastid	52.47	19.63
VIT_18s0001g10830.t01	Wine grape	mitochondrion, plasma membrane, plastid	54.94	19.35
TraesCS4A01G450400.1	Wheat	mitochondrion	50.62	19.34
TraesCS4B01G286600.1	Wheat	plastid	51.23	19.17
TraesCS7A01G038300.1	Wheat	mitochondrion	50.0	19.1
TraesCS4A01G449600.1	Wheat	mitochondrion	50.0	19.1
Zm00001d031811_P001	Maize	plastid	51.23	19.04
HORVU4Hr1G075070.7	Barley	plastid	50.62	18.85
TraesCS7D01G491900.1	Wheat	plastid	48.77	18.72
KXG25325	Sorghum	plastid	50.0	18.54
TraesCS3D01G033200.1	Wheat	plastid	49.38	18.48
TraesCS3D01G033500.1	Wheat	plastid	49.38	18.48
TraesCS3B01G036800.1	Wheat	plastid	49.38	18.43
Os08t0476900-01	Rice	plastid	48.77	18.37
Os08t0477100-01	Rice	plastid	48.77	18.33
TraesCS7D01G034300.1	Wheat	mitochondrion	46.3	18.16
TraesCS6B01G170200.1	Wheat	plastid	47.53	18.12
TraesCS3A01G046500.1	Wheat	plastid	48.15	18.01
TraesCS7A01G504700.1	Wheat	plastid	46.91	18.01
TraesCS7B01G411800.1	Wheat	plastid	47.53	17.99
TraesCS7A01G504400.1	Wheat	cytoskeleton, cytosol, peroxisome	44.44	17.82
TraesCS7A01G504100.1	Wheat	plastid	46.3	17.77
TraesCS7D01G491200.1	Wheat	mitochondrion, plastid	46.3	17.77
TraesCS7B01G411200.1	Wheat	plastid	45.68	17.54
EES15134	Sorghum	plastid	46.91	17.47
Zm00001d031813_P001	Maize	extracellular	46.91	17.47
VIT_18s0001g10920.t01	Wine grape	extracellular	46.91	17.43
TraesCS3B01G036500.1	Wheat	plastid	47.53	17.34
TraesCS2D01G166800.1	Wheat	cytosol	42.59	17.0
TraesCS2A01G159600.1	Wheat	cytosol	42.59	17.0
TraesCS2B01G185200.1	Wheat	cytosol	42.59	16.95
TraesCS7B01G411300.1	Wheat	mitochondrion	43.21	16.71
HORVU7Hr1G113080.1	Barley	cytosol	48.15	16.7
TraesCS5B01G529000.1	Wheat	cytosol	40.74	16.62
HORVU5Hr1G119810.5	Barley	cytosol	39.51	16.58
HORVU2Hr1G029000.2	Barley	cytosol	41.98	16.5
TraesCS5D01G528000.1	Wheat	cytosol, peroxisome, plastid	40.74	16.5
HORVU3Hr1G004220.4	Barley	cytosol, plastid	48.77	16.46
OQU80645	Sorghum	cytosol	40.12	16.21
HORVU5Hr1G119820.1	Barley	plastid	39.51	16.12
TraesCS1A01G407800.2	Wheat	cytosol	38.89	16.07
TraesCS5D01G528100.1	Wheat	cytosol	38.27	15.82
TraesCS5B01G529100.1	Wheat	cytosol	38.27	15.82
TraesCS4A01G345300.1	Wheat	cytosol	38.89	15.67
TraesCS7A01G504200.1	Wheat	mitochondrion	39.51	15.5
VIT_07s0005g01880.t01	Wine grape	plastid	35.8	15.26
Zm00001d031815_P001	Maize	cytosol	40.12	14.81
OQU80643	Sorghum	cytosol	41.36	13.62
VIT_07s0005g01840.t01	Wine grape	cytosol, mitochondrion, plastid	35.19	13.44
OQU83677	Sorghum	cytosol	26.54	12.91
Zm00001d031814_P001	Maize	cytosol, plasma membrane, plastid	33.33	12.83
VIT_07s0005g01860.t01	Wine grape	cytosol	29.63	12.63
VIT_07s0005g01890.t01	Wine grape	mitochondrion	29.63	12.6
VIT_18s0001g10930.t01	Wine grape	cytosol	23.46	12.14
HORVU7Hr1G006840.3	Barley	cytosol	21.6	12.07
VIT_10s0092g00150.t01	Wine grape	cytosol	25.93	9.84
VIT_13s0019g04200.t01	Wine grape	cytosol	27.16	9.61
VIT_07s0151g01130.t01	Wine grape	cytosol	18.52	7.79
HORVU2Hr1G037280.1	Barley	cytosol	4.94	3.1
Os08t0477500-01	Rice	plasma membrane	4.32	2.6
TraesCS7D01G491300.1	Wheat	plastid	3.7	2.33
TraesCS1A01G407900.1	Wheat	cytosol	2.47	1.68
KRH61261	Soybean	cytosol, peroxisome, plastid	1.85	1.33
VIT_00s0567g00050.t01	Wine grape	cytosol	0.62	0.47
Os08t0376500-00	Rice	plastid	0.62	0.38
HORVU7Hr1G113030.2	Barley	plastid	0.62	0.38

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.3	InterPro:Acyl_Trfase/lysoPLipase	ProteinID:CBI25856	ProteinID:CBI25856.3	UniProt:D7T5S2
EMBL:FN595550	GO:GO:0003674	GO:GO:0003824	GO:GO:0004620	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016787
GO:GO:0047372	PANTHER:PTHR32176	PANTHER:PTHR32176:SF6	SUPFAM:SSF52151	UniParc:UPI00015CDF07	ArrayExpress:VIT_00s0567g00040
EnsemblPlantsGene:VIT_00s0567g00040	EnsemblPlants:VIT_00s0567g00040.t01	RefSeq:XP_003635410	RefSeq:XP_003635410.1	:	:

Description

No Description!

Coordinates

chrUn:-:32006334..32007176

Molecular Weight (calculated)

18073.5 Da

IEP (calculated)

4.871

GRAVY (calculated)

-0.482

Length

162 amino acids

Sequence
(BLAST)

001: MHNSQSEEIN PMDPKRMLVL SLGTGAPKLE EKYNGATASS WGPLEWLLDN GATPLLDIYG HASSDMVDIH VSTLFQSRRC QKNYLRIQDD TLTGDASSVD
101: IATVENLERL EEIGKELLEK PVSRVNLETG KYEELVGEGT NRGALTQFAM LLSHQRKLRQ AM

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.