Factsheet for TraesCS4A01G449600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G034300.1	Wheat	mitochondrion	95.52	98.06
TraesCS4A01G450400.1	Wheat	mitochondrion	96.93	96.93
TraesCS7A01G038300.1	Wheat	mitochondrion	95.99	95.99
TraesCS3A01G046500.1	Wheat	plastid	82.31	80.6
TraesCS7A01G504100.1	Wheat	plastid	77.36	77.73
Os08t0476900-01	Rice	plastid	77.12	76.05
TraesCS4A01G017400.1	Wheat	plastid	77.59	75.98
HORVU7Hr1G006840.3	Barley	cytosol	51.89	75.86
Zm00001d031811_P001	Maize	plastid	77.59	75.46
TraesCS6A01G142200.1	Wheat	cytosol	58.49	75.38
TraesCS7A01G504700.1	Wheat	plastid	74.06	74.41
KXG25325	Sorghum	plastid	76.65	74.37
Os08t0477100-01	Rice	plastid	74.76	73.55
TraesCS7A01G504400.1	Wheat	cytoskeleton, cytosol, peroxisome	69.34	72.77
TraesCS7A01G504200.1	Wheat	mitochondrion	70.52	72.4
EES15134	Sorghum	plastid	74.06	72.18
Zm00001d031813_P001	Maize	extracellular	72.64	70.8
Os08t0376500-00	Rice	plastid	42.22	68.85
VIT_00s0567g00050.t01	Wine grape	cytosol	32.78	65.26
Os08t0376550-00	Rice	cytosol	27.59	64.64
VIT_00s0567g00060.t01	Wine grape	cytosol	55.42	62.83
Solyc04g079220.1.1	Tomato	cytosol	10.85	61.33
KRH61261	Soybean	cytosol, peroxisome, plastid	31.84	60.0
TraesCS1A01G407900.1	Wheat	cytosol	31.6	56.3
PGSC0003DMT400025955	Potato	extracellular	54.48	56.07
Solyc02g090490.2.1	Tomato	extracellular	54.48	56.07
PGSC0003DMT400002016	Potato	cytosol	33.96	55.81
TraesCS7A01G177300.1	Wheat	cytosol	53.54	55.64
TraesCS5A01G243200.1	Wheat	cytosol	52.59	55.06
TraesCS1A01G059100.1	Wheat	cytosol	53.07	55.01
Solyc02g065100.1.1	Tomato	endoplasmic reticulum, extracellular	53.3	54.99
TraesCS1A01G303400.1	Wheat	cytosol	52.12	54.43
Solyc03g044710.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	52.59	54.39
PGSC0003DMT400002019	Potato	golgi, vacuole	52.83	53.33
Solyc02g065090.2.1	Tomato	nucleus	52.83	53.33
PGSC0003DMT400058995	Potato	cytosol	19.81	52.5
Solyc04g079210.2.1	Tomato	cytosol	19.81	51.85
TraesCS4A01G018100.1	Wheat	cytosol	50.47	50.71
TraesCS2A01G159600.1	Wheat	cytosol	48.35	50.49
VIT_00s0567g00040.t01	Wine grape	cytosol	19.1	50.0
TraesCS4A01G345400.1	Wheat	cytosol	25.0	49.53
TraesCS1A01G407800.2	Wheat	cytosol	45.52	49.23
TraesCS4A01G345300.1	Wheat	cytosol	44.58	47.01
TraesCS6A01G004800.1	Wheat	cytosol	36.08	34.08
TraesCS7A01G012900.1	Wheat	cytosol	37.74	29.14
TraesCS4A01G083200.1	Wheat	cytosol	25.47	23.38
TraesCS7A01G464400.1	Wheat	cytosol	21.7	22.49
TraesCS5A01G422200.1	Wheat	cytosol	20.99	22.31
TraesCS5A01G422000.1	Wheat	cytosol	22.88	22.0
TraesCS5A01G047000.1	Wheat	cytosol, peroxisome, plastid	21.46	18.84

Protein Annotations

EnsemblPlants:TraesCS4A01G449600.1	EnsemblPlantsGene:TraesCS4A01G449600	Gene3D:3.40.1090.10	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
InterPro:Acyl_Trfase/lysoPLipase	InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32176	PANTHER:PTHR32176:SF15	PFAM:PF01734
PFscan:PS51635	SUPFAM:SSF52151	TIGR:cd07214	MapMan:5.7.2.2.3	:	:

Description

No Description!

Coordinates

chr4A:-:715638611..715641689

Molecular Weight (calculated)

46263.4 Da

IEP (calculated)

6.324

GRAVY (calculated)

-0.241

Length

424 amino acids

Sequence
(BLAST)

001: MRRPEQSNGP LTLQNPARRA LSGRVPSLAT PKSPPPAYGS IVTVLSIDGG GVRGIIPGTI LAFLEEKLQE FDGPDARISD YFDVMAGTST GGLVTAMLTA
101: PNADGRPLFA AKDINHFYME HCPNIFPPVS KGPFGLFKSM TGPKYDGEHL RSVIKEMLGD TRVDQTLSNI VIPTFDIKLL QPTIFSTYDA MKDVSKNALL
201: SDVCIGTSAA PTYLPGHHFE TKDEDGKPRA FNLIDGGVAS NNPTLLAMTD VSKQILMGNP DFFPIKPADY GKFMILSLGT GAAKIEEKFD VAQCSKWGVL
301: GWLYNRGATP IIDSFSQAST DLVDIHASVL FQALHCEKRY LRIHDDGLNG ETASVDVSTP ENLNRLVDIG KSLLKRQVCK VNVETGKNEP DSKNRGTNEE
401: ELIYFARMLS EERKARLLKE GNLA

Best Arabidopsis Sequence Match ( AT4G37060.1 )
(BLAST)

001: MENESPSKKN MPPSCGTLVT ILSLDGGGVR GIIAGVILAY LEKQLQELDG EHVRVADYFD VIAGTSTGGL VTAMLTAPDE NGRPRFAAKE IVPFYLEHCP
101: KIFPQPTGVL ALLPKLPKLL SGPKYSGNYL RTTLGKLLGE TKLRQTLTNV VIPTFDIKTL QPTIFSSYQA LTDPSLDVKV SDICIGTSAA PTYFPPYYFS
201: NEDSQGKTRH FNLVDGGVTA NNPTLVAMTA VTKQIVNNNP DMGTLNPLGY DQFLVISIGT GSAKKEERYS AKKAAKWGII SWLYEDGTTP ILDITFESSR
301: DIVHYHSSVV FKALQSEDKY LRIDDDTLEG DASTLDLSTK SNLENLIKLG EKMLTNRVMQ MNIDTGTYEP AAENINNDEQ LKRFAKILSE ERKLRRKRSD
401: KMTKDSSIGS QEIK

Arabidopsis Description

PLP5PATATIN-like protein 5 [Source:TAIR;Acc:AT4G37060]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.