Factsheet for TraesCS4A01G018100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G284700.1	Wheat	mitochondrion	96.68	96.68
TraesCS4B01G286000.1	Wheat	mitochondrion	96.45	96.22
HORVU4Hr1G074970.1	Barley	mitochondrion	94.79	94.79
Os03t0393900-01	Rice	mitochondrion	80.57	78.7
Zm00001d029412_P001	Maize	mitochondrion	76.78	75.7
EER94748	Sorghum	mitochondrion	77.73	75.06
TraesCS1A01G407900.1	Wheat	cytosol	31.28	55.46
TraesCS1A01G303400.1	Wheat	cytosol	52.13	54.19
TraesCS1A01G059100.1	Wheat	cytosol	52.37	54.03
TraesCS7A01G177300.1	Wheat	cytosol	51.18	52.94
TraesCS6A01G142200.1	Wheat	cytosol	41.23	52.89
TraesCS5A01G243200.1	Wheat	cytosol	48.58	50.62
TraesCS4A01G449600.1	Wheat	mitochondrion	50.71	50.47
TraesCS4A01G017400.1	Wheat	plastid	51.66	50.35
TraesCS4A01G450400.1	Wheat	mitochondrion	50.47	50.24
TraesCS3A01G046500.1	Wheat	plastid	51.42	50.12
TraesCS2A01G159600.1	Wheat	cytosol	48.1	50.0
TraesCS4A01G345400.1	Wheat	cytosol	25.36	50.0
TraesCS1A01G407800.2	Wheat	cytosol	46.45	50.0
TraesCS7A01G038300.1	Wheat	mitochondrion	49.76	49.53
TraesCS7A01G504400.1	Wheat	cytoskeleton, cytosol, peroxisome	47.39	49.51
TraesCS7A01G504100.1	Wheat	plastid	49.05	49.05
TraesCS7A01G504200.1	Wheat	mitochondrion	47.39	48.43
TraesCS7A01G504700.1	Wheat	plastid	47.39	47.39
TraesCS4A01G345300.1	Wheat	cytosol	44.55	46.77
TraesCS6A01G004800.1	Wheat	cytosol	36.02	33.85
TraesCS7A01G012900.1	Wheat	cytosol	40.28	30.97
TraesCS5A01G422200.1	Wheat	cytosol	23.93	25.31
TraesCS4A01G083200.1	Wheat	cytosol	27.25	24.89
TraesCS5A01G422000.1	Wheat	cytosol	25.36	24.26
TraesCS7A01G464400.1	Wheat	cytosol	21.33	22.0
TraesCS5A01G047000.1	Wheat	cytosol, peroxisome, plastid	23.22	20.29

Protein Annotations

EnsemblPlants:TraesCS4A01G018100.1	EnsemblPlantsGene:TraesCS4A01G018100	Gene3D:3.40.1090.10	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
InterPro:Acyl_Trfase/lysoPLipase	InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32176	PANTHER:PTHR32176:SF5	PFAM:PF01734
PFscan:PS51635	SEG:seg	SUPFAM:SSF52151	MapMan:5.7.2.2.3	:	:

Description

No Description!

Coordinates

chr4A:-:11811770..11813302

Molecular Weight (calculated)

45934.4 Da

IEP (calculated)

9.176

GRAVY (calculated)

-0.221

Length

422 amino acids

Sequence
(BLAST)

001: MASYWCRRPC ESCSTRAMAG SVVGQPVAPG QRVTVLTIDG GGIRGIIPGT ILDFLEAKLQ ELDGPGARLA DYFDCIAGTS TGGLITAMIT APGKDGRPLF
101: AARDVNRFYL DNGPYIFPQR RCALAAVTAS LRRPRYSGKY LHGKIRSMLG ETRLCDALTD VVIPTFDVKL LQPIIFSTYD AKSMPLKNAR LADICIGTSA
201: APTYLPAHHF HTHDGNGKER EYNLIDGGVA ANNPTMVAMT QITKKMMGKD REELYPVKPS DCGKFLVMSV GTGSTSDQGL YTAKQCSQWG IISWLRNKGM
301: APIIDIFMAA SSDLVDIHAA VLFQSLHSDG DYLRIQDNSL HGPAATVDAA TPENMAELLR IGERMLAQRV SRVNVETGRY EEVKGAGSNA DALAGFARQL
401: SDERRTRLER RRGGAGRLKS RR

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.