Skip to main content
crop-pal logo
Wheat
Search for another protein from :
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • mitochondrion 2
  • cytosol 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS3B01G540300.1
TraesCS3B01G540900.1
TraesCS3D01G485500.1
TraesCS3D01G486000.1
TraesCS5A01G243200.1
TraesCS5B01G241100.2
TraesCS5D01G249800.1
TraesCS7A01G054800.2
TraesCS7D01G049900.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G26560.1 TraesCS3B01G540300.1 AT1G34570.1 21798944
AT2G26560.1 TraesCS3B01G540900.1 AT1G34570.1 21798944
AT2G26560.1 TraesCS3D01G485500.1 AT1G34570.1 21798944
AT2G26560.1 TraesCS3D01G486000.1 AT1G34570.1 21798944
AT2G26560.1 TraesCS7A01G054800.2 AT1G34570.1 21798944
AT2G26560.1 TraesCS7D01G049900.2 AT1G34570.1 21798944
AT2G26560.1 TraesCS5A01G243200.1 AT2G26560.1 21798944
AT2G26560.1 TraesCS5B01G241100.2 AT2G26560.1 21798944
AT2G26560.1 TraesCS5D01G249800.1 AT2G26560.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G249800.1 Wheat cytosol 98.02 98.02
TraesCS5B01G241100.2 Wheat cytosol 96.79 96.08
HORVU5Hr1G069130.5 Barley cytosol 95.31 95.31
Os09t0462400-00 Rice cytosol 72.84 86.26
Zm00001d005911_P001 Maize cytosol 83.7 84.33
KXG35787 Sorghum cytosol 81.23 83.72
GSMUA_Achr11P... Banana cytosol 56.54 67.75
VIT_18s0001g10850.t01 Wine grape cytosol 68.4 67.07
VIT_18s0001g10870.t01 Wine grape cytosol 68.15 66.83
VIT_18s0001g10910.t01 Wine grape cytosol 67.9 66.59
Bra000578.1-P Field mustard cytosol 65.68 65.68
CDY21469 Canola cytosol, peroxisome, vacuole 65.68 65.36
CDX83197 Canola cytosol 65.43 65.11
VIT_18s0001g10930.t01 Wine grape cytosol 49.63 64.22
AT2G26560.1 Thale cress cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 63.46 63.15
KRH15338 Soybean cytosol 62.47 62.01
KRH15334 Soybean cytosol 62.22 61.76
VIT_18s0001g10900.t01 Wine grape cytosol 30.37 61.19
KRH05708 Soybean cytosol 56.3 60.48
VIT_18s0001g10830.t01 Wine grape mitochondrion, plasma membrane, plastid 68.4 60.22
KRH05709 Soybean cytosol 60.49 60.05
TraesCS1A01G407900.1 Wheat cytosol 33.58 57.14
TraesCS6A01G142200.1 Wheat cytosol 45.43 55.93
TraesCS7A01G177300.1 Wheat cytosol 54.07 53.68
TraesCS1A01G059100.1 Wheat cytosol 54.07 53.55
TraesCS3A01G046500.1 Wheat plastid 57.04 53.35
TraesCS4A01G017400.1 Wheat plastid 56.79 53.12
TraesCS1A01G303400.1 Wheat cytosol 53.09 52.96
TraesCS2A01G159600.1 Wheat cytosol 53.09 52.96
TraesCS4A01G449600.1 Wheat mitochondrion 55.06 52.59
TraesCS4A01G450400.1 Wheat mitochondrion 54.32 51.89
TraesCS7A01G038300.1 Wheat mitochondrion 54.32 51.89
TraesCS7A01G504400.1 Wheat cytoskeleton, cytosol, peroxisome 51.36 51.49
TraesCS1A01G407800.2 Wheat cytosol 48.89 50.51
TraesCS7A01G504100.1 Wheat plastid 52.59 50.47
TraesCS4A01G345400.1 Wheat cytosol 26.67 50.47
TraesCS7A01G504700.1 Wheat plastid 52.1 50.0
TraesCS7A01G504200.1 Wheat mitochondrion 50.12 49.15
TraesCS4A01G345300.1 Wheat cytosol 48.64 49.01
TraesCS4A01G018100.1 Wheat cytosol 50.62 48.58
TraesCS6A01G004800.1 Wheat cytosol 36.79 33.18
TraesCS7A01G012900.1 Wheat cytosol 41.73 30.78
TraesCS5A01G422200.1 Wheat cytosol 25.19 25.56
TraesCS5A01G422000.1 Wheat cytosol 26.91 24.72
TraesCS4A01G083200.1 Wheat cytosol 27.16 23.81
TraesCS7A01G464400.1 Wheat cytosol 23.21 22.98
TraesCS5A01G047000.1 Wheat cytosol, peroxisome, plastid 24.94 20.91
Protein Annotations
Gene3D:3.40.1090.10MapMan:5.7.2.2.3InterPro:Acyl_Trfase/lysoPLipaseGO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006629GO:GO:0006950GO:GO:0008150
GO:GO:0008152GO:GO:0008219GO:GO:0009058GO:GO:0009605GO:GO:0009607GO:GO:0009626
GO:GO:0009628GO:GO:0009987GO:GO:0016020GO:GO:0016298GO:GO:0016787GO:GO:0031408
GO:GO:0046686GO:GO:0051607GO:GO:0071456InterPro:IPR002641PFAM:PF01734InterPro:PNPLA_dom
PFscan:PS51635PANTHER:PTHR32176PANTHER:PTHR32176:SF6SUPFAM:SSF52151EnsemblPlantsGene:TraesCS5A01G243200EnsemblPlants:TraesCS5A01G243200.1
TIGR:cd07214:::::
Description
No Description!
Coordinates
chr5A:+:457900911..457903390
Molecular Weight (calculated)
44802.1 Da
IEP (calculated)
9.298
GRAVY (calculated)
-0.195
Length
405 amino acids
Sequence
(BLAST)
001: METGKHIFCR QPPTYGNLIT ILSIDGGGIR GIIPAVALAF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAVLTAPNK KRRPLFAAKD IQAFYMNHAP
101: RIFPQLRGAF GRIMGILRSL SGPYYDGKYL HEVVRKKLGS ARLHQTLTNV VIPTFDIKRL QPTIFSSYEV KTKKKKNTMN ALLSDICIST SAAPTYLPAH
201: YFKTEDSHGN IKEFNLIDGG VAANNPALVA IGEVSKQIFK QDPDFFPIKP MDYGRFLVIS LGTGSSKFEE KYDAQKAKSW GVLDWLLSSG STPLVDIFTR
301: ASADMVDIHI ASVFKALHSE QNYLRIQDDN LRGTLSSVDV ATKDNLEKLV NVGEMLLKKP VSRANLETGQ MVPACSDIEE TNEEALKRFA KLLSDEKQIR
401: QARSP
Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)
001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI
Arabidopsis Description
PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.