Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os08t0477500-01 | Rice | plasma membrane | 70.59 | 62.45 |
| VIT_00s0567g00050.t01 | Wine grape | cytosol | 52.94 | 59.15 |
| KRH61261 | Soybean | cytosol, peroxisome, plastid | 52.94 | 56.0 |
| TraesCS5B01G529000.1 | Wheat | cytosol | 92.44 | 55.42 |
| TraesCS5D01G528000.1 | Wheat | cytosol, peroxisome, plastid | 92.86 | 55.25 |
| TraesCS4A01G345300.1 | Wheat | cytosol | 90.76 | 53.73 |
| Solyc04g079220.1.1 | Tomato | cytosol | 16.39 | 52.0 |
| HORVU5Hr1G119820.1 | Barley | plastid | 84.45 | 50.63 |
| TraesCS1A01G407800.2 | Wheat | cytosol | 82.35 | 50.0 |
| TraesCS2A01G159600.1 | Wheat | cytosol | 77.73 | 45.57 |
| OQU80645 | Sorghum | cytosol | 73.95 | 43.89 |
| Zm00001d031815_P001 | Maize | cytosol | 75.21 | 40.77 |
| Zm00001d031814_P001 | Maize | cytosol, plasma membrane, plastid | 66.39 | 37.53 |
| VIT_00s0567g00060.t01 | Wine grape | cytosol | 58.4 | 37.17 |
| TraesCS5A01G243200.1 | Wheat | cytosol | 57.14 | 33.58 |
| OQU80643 | Sorghum | cytosol | 68.49 | 33.13 |
| TraesCS4A01G345400.1 | Wheat | cytosol | 29.41 | 32.71 |
| TraesCS7A01G504400.1 | Wheat | cytoskeleton, cytosol, peroxisome | 55.46 | 32.67 |
| Solyc02g090490.2.1 | Tomato | extracellular | 55.46 | 32.04 |
| Solyc02g065100.1.1 | Tomato | endoplasmic reticulum, extracellular | 54.62 | 31.63 |
| TraesCS4A01G449600.1 | Wheat | mitochondrion | 56.3 | 31.6 |
| TraesCS7A01G504100.1 | Wheat | plastid | 55.88 | 31.52 |
| TraesCS4A01G017400.1 | Wheat | plastid | 57.14 | 31.41 |
| TraesCS4A01G450400.1 | Wheat | mitochondrion | 55.88 | 31.37 |
| PGSC0003DMT400025955 | Potato | extracellular | 54.2 | 31.31 |
| TraesCS7A01G504700.1 | Wheat | plastid | 55.46 | 31.28 |
| TraesCS4A01G018100.1 | Wheat | cytosol | 55.46 | 31.28 |
| Solyc03g044710.2.1 | Tomato | endoplasmic reticulum, golgi, vacuole | 53.78 | 31.22 |
| TraesCS1A01G059100.1 | Wheat | cytosol | 53.36 | 31.05 |
| TraesCS1A01G303400.1 | Wheat | cytosol | 52.94 | 31.03 |
| Solyc02g065090.2.1 | Tomato | nucleus | 54.62 | 30.95 |
| TraesCS3A01G046500.1 | Wheat | plastid | 55.88 | 30.72 |
| PGSC0003DMT400002019 | Potato | golgi, vacuole | 54.2 | 30.71 |
| TraesCS7A01G038300.1 | Wheat | mitochondrion | 54.62 | 30.66 |
| TraesCS7A01G177300.1 | Wheat | cytosol | 52.1 | 30.39 |
| TraesCS7A01G504200.1 | Wheat | mitochondrion | 52.52 | 30.27 |
| TraesCS6A01G142200.1 | Wheat | cytosol | 37.82 | 27.36 |
| TraesCS6A01G004800.1 | Wheat | cytosol | 39.08 | 20.71 |
| PGSC0003DMT400002016 | Potato | cytosol | 22.27 | 20.54 |
| TraesCS7A01G012900.1 | Wheat | cytosol | 43.28 | 18.76 |
| TraesCS5A01G422200.1 | Wheat | cytosol | 27.31 | 16.29 |
| TraesCS5A01G422000.1 | Wheat | cytosol | 28.15 | 15.19 |
| TraesCS7A01G464400.1 | Wheat | cytosol | 25.21 | 14.67 |
| TraesCS4A01G083200.1 | Wheat | cytosol | 27.31 | 14.07 |
| TraesCS5A01G047000.1 | Wheat | cytosol, peroxisome, plastid | 27.31 | 13.46 |
| VIT_00s0567g00040.t01 | Wine grape | cytosol | 1.68 | 2.47 |
| PGSC0003DMT400058995 | Potato | cytosol | 1.26 | 1.88 |
| Solyc04g079210.2.1 | Tomato | cytosol | 1.26 | 1.85 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G407900.1 | EnsemblPlantsGene:TraesCS1A01G407900 | Gene3D:3.40.1090.10 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 |
| InterPro:Acyl_Trfase/lysoPLipase | InterPro:IPR002641 | InterPro:PNPLA_dom | PANTHER:PTHR32176 | PANTHER:PTHR32176:SF7 | PFAM:PF01734 |
| PFscan:PS51635 | SUPFAM:SSF52151 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr1A:+:570159374..570160565
Molecular Weight (calculated)
25319.2 Da
IEP (calculated)
7.620
GRAVY (calculated)
-0.112
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSSSAGG DKVNKLVTIL SIDGGGVRGI IPATVLAFLE KELQKLDGPD ARIADYFDVV AGTSTGGLLT VMLTAPDKDG RPLFDAKDLA KFYIDESPKI
101: FSQKDSIFSK IGTALGMVTG PKYNGKYLQS LLRRHLGATK LDGALTSVVI PAFDITHLQP TIFSSYQLKN QPAKNALLSD IAIGTSAAPT FFPAHYFETE
201: DGKGGTRAFN LIDGGVAANN PTLCDEPCGR GHHRGWER
101: FSQKDSIFSK IGTALGMVTG PKYNGKYLQS LLRRHLGATK LDGALTSVVI PAFDITHLQP TIFSSYQLKN QPAKNALLSD IAIGTSAAPT FFPAHYFETE
201: DGKGGTRAFN LIDGGVAANN PTLCDEPCGR GHHRGWER
001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI
Arabidopsis Description
PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.