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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • vacuole 2
  • mitochondrion 2
  • cytosol 1
  • plastid 3
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid, vacuole
BaCelLo:nucleus
EpiLoc:vacuole
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plastid, vacuole
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G529000.1 Wheat cytosol 87.91 87.91
TraesCS5D01G528000.1 Wheat cytosol, peroxisome, plastid 87.66 87.0
TraesCS1A01G407900.1 Wheat cytosol 50.63 84.45
TraesCS4A01G345300.1 Wheat cytosol 83.38 82.34
HORVU5Hr1G119810.5 Barley cytosol 76.57 78.76
HORVU2Hr1G037280.1 Barley cytosol 46.1 70.93
HORVU2Hr1G029000.2 Barley cytosol 73.3 70.63
OQU80645 Sorghum cytosol 71.03 70.32
Os08t0477500-01 Rice plasma membrane 44.84 66.17
Zm00001d031815_P001 Maize cytosol 70.28 63.55
VIT_00s0567g00050.t01 Wine grape cytosol 31.49 58.69
KRH61261 Soybean cytosol, peroxisome, plastid 32.75 57.78
Zm00001d031814_P001 Maize cytosol, plasma membrane, plastid 60.45 57.01
VIT_00s0567g00060.t01 Wine grape cytosol 52.39 55.62
Solyc04g079220.1.1 Tomato cytosol 10.08 53.33
OQU80643 Sorghum cytosol 65.49 52.85
HORVU5Hr1G069130.5 Barley cytosol 51.64 50.62
HORVU7Hr1G113030.2 Barley plastid 32.49 49.43
HORVU1Hr1G069200.2 Barley cytosol 48.87 47.78
Solyc02g065090.2.1 Tomato nucleus 50.38 47.62
Solyc02g065100.1.1 Tomato endoplasmic reticulum, extracellular 49.12 47.45
HORVU1Hr1G012140.1 Barley plastid 48.36 47.06
Solyc02g090490.2.1 Tomato extracellular 48.61 46.84
PGSC0003DMT400002019 Potato golgi, vacuole 49.37 46.67
Solyc03g044710.2.1 Tomato endoplasmic reticulum, golgi, vacuole 48.11 46.59
PGSC0003DMT400025955 Potato extracellular 48.11 46.36
HORVU4Hr1G074970.1 Barley mitochondrion 49.12 46.21
HORVU4Hr1G075070.7 Barley plastid 50.13 45.75
PGSC0003DMT400002016 Potato cytosol 29.22 44.96
Solyc04g079210.2.1 Tomato cytosol 17.88 43.83
HORVU4Hr1G019140.24 Barley cytosol 23.68 43.32
HORVU7Hr1G113080.1 Barley cytosol 50.38 42.83
HORVU7Hr1G036460.1 Barley plasma membrane 49.12 42.67
HORVU4Hr1G050060.10 Barley plastid 27.2 41.86
HORVU3Hr1G101170.1 Barley mitochondrion, plastid 20.91 41.29
PGSC0003DMT400058995 Potato cytosol 16.62 41.25
HORVU2Hr1G060260.1 Barley plastid 28.21 40.73
HORVU3Hr1G004220.4 Barley cytosol, plastid 49.12 40.62
HORVU6Hr1G027900.2 Barley cytosol 34.51 39.94
HORVU7Hr1G006840.3 Barley cytosol 28.97 39.66
VIT_00s0567g00040.t01 Wine grape cytosol 16.12 39.51
HORVU6Hr1G001990.1 Barley cytosol 35.01 30.89
HORVU2Hr1G126660.1 Barley cytosol, nucleus 40.55 28.6
HORVU5Hr1G103060.1 Barley mitochondrion 24.94 20.84
HORVU0Hr1G008670.3 Barley cytosol 19.65 19.31
HORVU5Hr1G093250.4 Barley cytosol 21.16 18.67
HORVU2Hr1G126570.1 Barley extracellular 16.62 18.49
HORVU5Hr1G011400.6 Barley mitochondrion 20.4 18.08
HORVU7Hr1G106600.4 Barley cytosol 8.82 13.62
Protein Annotations
EnsemblPlants:HORVU5Hr1G119820.1EnsemblPlantsGene:HORVU5Hr1G119820Gene3D:3.40.1090.10GO:GO:0003674GO:GO:0003824GO:GO:0006629
GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0016042GO:GO:0016787InterPro:Acyl_Trfase/lysoPLipase
InterPro:IPR002641InterPro:PNPLA_domPANTHER:PTHR32176PANTHER:PTHR32176:SF7PFAM:PF01734PFscan:PS51635
SUPFAM:SSF52151UniParc:UPI0002955016UniProt:M0WCZ3MapMan:5.7.2.2.3::
Description
Patatin [Source:UniProtKB/TrEMBL;Acc:M0WCZ3]
Coordinates
chrchr5H:+:656664346..656666785
Molecular Weight (calculated)
42035.2 Da
IEP (calculated)
6.154
GRAVY (calculated)
-0.038
Length
397 amino acids
Sequence
(BLAST)
001: MAASSSSGQG ANKVNKLVTI LSIDGGGVRG IIPATILAFL EKELQKLDGA DARIADYFDV IAGTSTGGLL TVMLAAPNKD GRPLFNAENL AQFYINESPK
101: IFPQKDSIFS KIGTALGMVT GPKYNGKYLQ SLLRERLGET RLDGALTSLV IPTFDIAHLQ PTIFSSFQLK NQPTKNALLS DITISTSAAP TFFPAHYFET
201: DDGNGGTRAF NLIDGGVAAN NPTLCAMSQV AEDIIVAGNG DLLGMSYMVI SIGCGTSSNP KGKYSAKDAA KWGILNWILK GGTVPILDMF SASSGDMVDI
301: HLSVLSAALG SSHQYLRIQY DQLSGSAGSI DDCSKANLNK LVEIGNELLG KKVSQVDLET GRNVEVPGGG TNAEQLAEYA KQLSNERRRR STSVSVL
Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)
001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI
Arabidopsis Description
PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.