Factsheet for HORVU5Hr1G119810.5

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G529100.1	Wheat	cytosol	93.78	92.35
TraesCS5D01G528100.1	Wheat	cytosol	93.52	92.09
TraesCS1A01G407800.2	Wheat	cytosol	92.49	91.07
TraesCS4A01G345400.1	Wheat	cytosol	49.74	89.72
HORVU5Hr1G119820.1	Barley	plastid	78.76	76.57
HORVU2Hr1G029000.2	Barley	cytosol	72.02	67.48
HORVU2Hr1G037280.1	Barley	cytosol	44.82	67.05
OQU80645	Sorghum	cytosol	69.43	66.83
Os08t0477500-01	Rice	plasma membrane	42.75	61.34
Zm00001d031815_P001	Maize	cytosol	69.69	61.28
VIT_00s0567g00050.t01	Wine grape	cytosol	33.16	60.09
Zm00001d031814_P001	Maize	cytosol, plasma membrane, plastid	62.44	57.24
VIT_00s0567g00060.t01	Wine grape	cytosol	51.81	53.48
KRH61261	Soybean	cytosol, peroxisome, plastid	30.57	52.44
OQU80643	Sorghum	cytosol	66.84	52.44
Solyc04g079220.1.1	Tomato	cytosol	9.84	50.67
HORVU5Hr1G069130.5	Barley	cytosol	51.04	48.64
HORVU4Hr1G074970.1	Barley	mitochondrion	52.07	47.63
HORVU7Hr1G113030.2	Barley	plastid	32.12	47.51
Solyc02g065090.2.1	Tomato	nucleus	51.3	47.14
HORVU1Hr1G069200.2	Barley	cytosol	49.22	46.8
PGSC0003DMT400002019	Potato	golgi, vacuole	50.78	46.67
Solyc03g044710.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	49.48	46.59
Solyc02g065100.1.1	Tomato	endoplasmic reticulum, extracellular	49.48	46.47
Solyc02g090490.2.1	Tomato	extracellular	49.22	46.12
HORVU1Hr1G012140.1	Barley	plastid	48.7	46.08
HORVU4Hr1G075070.7	Barley	plastid	51.81	45.98
PGSC0003DMT400025955	Potato	extracellular	48.7	45.63
PGSC0003DMT400002016	Potato	cytosol	29.79	44.57
HORVU4Hr1G019140.24	Barley	cytosol	24.35	43.32
HORVU7Hr1G113080.1	Barley	cytosol	51.04	42.18
Solyc04g079210.2.1	Tomato	cytosol	17.36	41.36
HORVU7Hr1G036460.1	Barley	plasma membrane	48.96	41.36
PGSC0003DMT400058995	Potato	cytosol	16.84	40.62
HORVU6Hr1G027900.2	Barley	cytosol	36.01	40.52
HORVU3Hr1G004220.4	Barley	cytosol, plastid	49.74	40.0
VIT_00s0567g00040.t01	Wine grape	cytosol	16.58	39.51
HORVU7Hr1G006840.3	Barley	cytosol	29.53	39.31
HORVU4Hr1G050060.10	Barley	plastid	26.17	39.15
HORVU2Hr1G060260.1	Barley	plastid	27.46	38.55
HORVU3Hr1G101170.1	Barley	mitochondrion, plastid	19.95	38.31
HORVU6Hr1G001990.1	Barley	cytosol	34.72	29.78
HORVU2Hr1G126660.1	Barley	cytosol, nucleus	40.93	28.06
HORVU5Hr1G103060.1	Barley	mitochondrion	26.17	21.26
HORVU0Hr1G008670.3	Barley	cytosol	20.73	19.8
HORVU5Hr1G093250.4	Barley	cytosol	22.54	19.33
HORVU2Hr1G126570.1	Barley	extracellular	17.88	19.33
HORVU5Hr1G011400.6	Barley	mitochondrion	21.5	18.53
HORVU7Hr1G106600.4	Barley	cytosol	10.36	15.56

Protein Annotations

EnsemblPlants:HORVU5Hr1G119810.5	EnsemblPlantsGene:HORVU5Hr1G119810	Gene3D:3.40.1090.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016042	GO:GO:0016787	InterPro:Acyl_Trfase/lysoPLipase
InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32176	PANTHER:PTHR32176:SF7	PFAM:PF01734	PFscan:PS51635
SUPFAM:SSF52151	UniParc:UPI00029512F1	UniProt:M0XQA8	MapMan:5.7.2.2.3	:	:

Description

Patatin [Source:UniProtKB/TrEMBL;Acc:M0XQA8]

Coordinates

chrchr5H:-:656651815..656654121

Molecular Weight (calculated)

41213.4 Da

IEP (calculated)

6.884

GRAVY (calculated)

-0.049

Length

386 amino acids

Sequence
(BLAST)

001: MAAGDQAKVV TILSIDGGGV RGIIPAIVLA FLEKELQKLD GPDARIADYF DVVAGTSTGG LLTVMLTAPD KDGRPLFDGK DLAKFYIDES PKIFPQNCRG
101: SIFSKIGSGL ATVTGPKYDG KYLHSLLRRH LGDTKLDGAL TSVVIPAFDI AHLQPIIFSS FQLENQPAKN ALLSDIAIGT SAAPTFFPAH YFETNDGKGG
201: TRAYNLIDGG VAANNPTLLA MNQVAEHMVL AGQKPVGKSY IVISIGCGTS SLPKLKYSAK DAAKWGILSW LVKDGTVPIL DMFNAASADM VDFHLSVLSA
301: ILGSSHQYLR IQYDKLSGSA GSIDDCSKAN LDRLVKIGDE LLAEKVSGVD LETGRNVEVP GGGTNAEELA KYARQLSDER RRRRNN

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.