Factsheet for HORVU1Hr1G012140.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
vacuole 2
plastid 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G077500.1	Wheat	cytosol, peroxisome, plastid	90.69	90.69
TraesCS1A01G059100.1	Wheat	cytosol	90.44	90.22
TraesCS1D01G060500.1	Wheat	cytosol	90.2	89.54
HORVU1Hr1G069200.2	Barley	cytosol	83.58	83.99
EES08841	Sorghum	cytosol	76.96	76.03
HORVU7Hr1G036460.1	Barley	plasma membrane	85.05	75.93
EES08840	Sorghum	cytosol	75.0	75.56
Os11t0614400-01	Rice	plasma membrane	76.72	75.06
Zm00001d007604_P001	Maize	cytosol, peroxisome, plastid	74.26	74.45
Zm00001d007620_P001	Maize	cytosol, peroxisome, plastid	74.02	74.2
Zm00001d007616_P001	Maize	cytosol, peroxisome, plastid	74.02	74.2
EES10106	Sorghum	plastid	74.26	73.9
Zm00001d007618_P001	Maize	mitochondrion	73.53	73.71
Zm00001d048841_P001	Maize	mitochondrion, plasma membrane	73.28	72.93
Zm00001d007623_P002	Maize	mitochondrion	74.02	72.25
Os11t0614500-02	Rice	cytosol	41.42	68.98
HORVU5Hr1G069130.5	Barley	cytosol	54.17	54.57
HORVU4Hr1G074970.1	Barley	mitochondrion	54.41	52.61
HORVU4Hr1G075070.7	Barley	plastid	55.88	52.41
HORVU7Hr1G113030.2	Barley	plastid	32.84	51.34
HORVU2Hr1G037280.1	Barley	cytosol	32.11	50.78
HORVU2Hr1G029000.2	Barley	cytosol	49.75	49.27
HORVU3Hr1G101170.1	Barley	mitochondrion, plastid	24.02	48.76
HORVU5Hr1G119810.5	Barley	cytosol	46.08	48.7
HORVU5Hr1G119820.1	Barley	plastid	47.06	48.36
HORVU4Hr1G050060.10	Barley	plastid	30.39	48.06
HORVU2Hr1G060260.1	Barley	plastid	32.35	48.0
HORVU7Hr1G113080.1	Barley	cytosol	54.41	47.54
HORVU3Hr1G004220.4	Barley	cytosol, plastid	55.64	47.29
HORVU6Hr1G027900.2	Barley	cytosol	37.5	44.61
HORVU7Hr1G006840.3	Barley	cytosol	30.64	43.1
HORVU4Hr1G019140.24	Barley	cytosol	22.79	42.86
HORVU6Hr1G001990.1	Barley	cytosol	42.65	38.67
HORVU2Hr1G126660.1	Barley	cytosol, nucleus	42.16	30.55
HORVU0Hr1G008670.3	Barley	cytosol	20.59	20.79
HORVU5Hr1G093250.4	Barley	cytosol	22.55	20.44
HORVU5Hr1G103060.1	Barley	mitochondrion	23.77	20.42
HORVU2Hr1G126570.1	Barley	extracellular	17.65	20.17
HORVU5Hr1G011400.6	Barley	mitochondrion	20.59	18.75
HORVU7Hr1G106600.4	Barley	cytosol	9.31	14.79

Protein Annotations

EnsemblPlants:HORVU1Hr1G012140.1	EnsemblPlantsGene:HORVU1Hr1G012140	Gene3D:3.40.1090.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016042	GO:GO:0016787	InterPro:Acyl_Trfase/lysoPLipase
InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32176	PANTHER:PTHR32176:SF10	PFAM:PF01734	PFscan:PS51635
SUPFAM:SSF52151	UniParc:UPI0002958A69	UniProt:M0YXC5	MapMan:5.7.2.2.3	:	:

Description

Patatin [Source:UniProtKB/TrEMBL;Acc:M0YXC5]

Coordinates

chrchr1H:+:30191336..30193385

Molecular Weight (calculated)

44569.2 Da

IEP (calculated)

6.288

GRAVY (calculated)

-0.164

Length

408 amino acids

Sequence
(BLAST)

001: MCSHGHAPTC VTCPPPSQGQ LITVLSIDGG GIRGLIPSTI LACLESKLQE LDGPDARIAD YFDVIAGTST GALVASMLAA PGENKRPLFQ AKDINKFYLD
101: NGPKIFPQRS WGFLTPIGNL FGAVNGPKYD GKFLHDKIKS LTHDVTIAQT VTNIIVPTFD IKFLQPVIFN TYEARVDPLK NAHLSDICIS TSAAPTYFPA
201: HYFTTHDPAG NLSDREYHLI DGGVAANNPT MAAMSMITKE VLRRNPDFTH GKPADYNNYL IISIGTGSAK QAEKYTAPEC AKWGVLRWLY DGGFTPLIDV
301: FSHASADMVD IHAAVLFEAL RIEENYLRIQ DDSLTGQTSS VDIATKENME ALIGIGKNLL TKTVSRVNID NGMYETVDGA GTNEEALVRF AKRLSEERKL
401: RQTNLNSK

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.