Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d007620_P001 | Maize | cytosol, peroxisome, plastid | 99.75 | 99.75 |
| Zm00001d007604_P001 | Maize | cytosol, peroxisome, plastid | 99.26 | 99.26 |
| Zm00001d007618_P001 | Maize | mitochondrion | 99.26 | 99.26 |
| Zm00001d007623_P002 | Maize | mitochondrion | 99.51 | 96.89 |
| EES08840 | Sorghum | cytosol | 94.1 | 94.57 |
| Zm00001d048841_P001 | Maize | mitochondrion, plasma membrane | 89.68 | 89.02 |
| TraesCS7A01G177300.1 | Wheat | cytosol | 77.4 | 77.21 |
| TraesCS7B01G082400.1 | Wheat | cytosol | 77.15 | 76.96 |
| TraesCS7D01G178600.1 | Wheat | cytosol | 77.15 | 76.96 |
| TraesCS1D01G060500.1 | Wheat | cytosol | 77.64 | 76.89 |
| TraesCS1B01G077500.1 | Wheat | cytosol, peroxisome, plastid | 76.9 | 76.72 |
| TraesCS1B01G313800.1 | Wheat | cytosol | 76.41 | 76.6 |
| TraesCS1A01G059100.1 | Wheat | cytosol | 76.9 | 76.53 |
| TraesCS1D01G302900.1 | Wheat | cytosol | 75.92 | 76.3 |
| TraesCS1A01G303400.1 | Wheat | cytosol | 75.68 | 75.86 |
| Os11t0614400-01 | Rice | plasma membrane | 77.64 | 75.78 |
| HORVU1Hr1G069200.2 | Barley | cytosol | 74.69 | 74.88 |
| HORVU1Hr1G012140.1 | Barley | plastid | 74.2 | 74.02 |
| Os11t0614500-02 | Rice | cytosol | 44.23 | 73.47 |
| HORVU7Hr1G036460.1 | Barley | plasma membrane | 76.9 | 68.49 |
| Zm00001d005911_P001 | Maize | cytosol | 54.55 | 55.22 |
| Zm00001d031811_P001 | Maize | plastid | 55.77 | 52.06 |
| Zm00001d029412_P001 | Maize | mitochondrion | 52.83 | 50.23 |
| Zm00001d031813_P001 | Maize | extracellular | 53.56 | 50.11 |
| Zm00001d031815_P001 | Maize | cytosol | 54.05 | 50.11 |
| Zm00001d031814_P001 | Maize | cytosol, plasma membrane, plastid | 48.65 | 47.03 |
| Zm00001d042504_P002 | Maize | cytosol | 45.7 | 44.18 |
| Zm00001d042041_P001 | Maize | cytosol | 38.33 | 41.16 |
| Zm00001d052923_P001 | Maize | endoplasmic reticulum, extracellular | 47.91 | 38.31 |
| Zm00001d028482_P001 | Maize | cytosol | 24.57 | 21.74 |
| Zm00001d034340_P001 | Maize | cytosol | 23.34 | 21.69 |
| Zm00001d018788_P001 | Maize | nucleus | 24.08 | 21.03 |
| Zm00001d033254_P001 | Maize | cytosol | 21.38 | 20.28 |
| Zm00001d014386_P001 | Maize | cytosol, plastid | 19.41 | 19.36 |
| Zm00001d033256_P001 | Maize | cytosol | 20.64 | 18.96 |
| Zm00001d041481_P001 | Maize | cytosol | 20.88 | 18.72 |
| Zm00001d000203_P001 | Maize | cytosol | 19.66 | 17.98 |
| Zm00001d031053_P001 | Maize | plastid | 20.88 | 15.21 |
Protein Annotations
| Gene3D:3.40.1090.10 | MapMan:5.7.2.2.3 | UniProt:A0A1D6F7L4 | InterPro:Acyl_Trfase/lysoPLipase | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0016042 | GO:GO:0016787 |
| InterPro:IPR002641 | ProteinID:ONM27217.1 | PFAM:PF01734 | InterPro:PNPLA_dom | PFscan:PS51635 | PANTHER:PTHR32176 |
| PANTHER:PTHR32176:SF10 | SUPFAM:SSF52151 | UniParc:UPI000843234A | EnsemblPlantsGene:Zm00001d007616 | EnsemblPlants:Zm00001d007616_P001 | EnsemblPlants:Zm00001d007616_T001 |
Description
Patatin-like protein 2
Coordinates
chr2:+:236348383..236350369
Molecular Weight (calculated)
44419.0 Da
IEP (calculated)
6.676
GRAVY (calculated)
-0.148
Length
407 amino acids
Sequence
(BLAST)
(BLAST)
001: MESNASSNCA TVPQPPPSTG KLITILSIDG GGIRGLIPAT IIAHLEAKLQ ELDGPDARIA DYFDVIAGTS TGALLTSMLA APDQNNRPLF FAKDLNTFYL
101: ENGPKIFPQK KAGFLTPVAN LLGLVRGPKY DGVFLHDKIK SLTHDVRVAD TVTNVIVPAF DVKYLQPIIF STYEAKNDTL KNAHLSDICI STSAAPTYFP
201: AHFFKTEATD GRSREFHLVD GGVAANNPTM VAMSMLTKEV LRRNPDFNAG RPTEYTNYLI ISVGTGSAKQ AEKYTAPQCA KWGLFQWLYN GGFTPIIDIF
301: SHASSDMVDI HAAVLFQALH CEKNYLRIQD DTLIGNTSSV DIATKENMES LIGIGQDLLK KPVARVNIDT GVYEPCSGEG TNAEALAHFA KKLSDERKLR
401: KRNLDSY
101: ENGPKIFPQK KAGFLTPVAN LLGLVRGPKY DGVFLHDKIK SLTHDVRVAD TVTNVIVPAF DVKYLQPIIF STYEAKNDTL KNAHLSDICI STSAAPTYFP
201: AHFFKTEATD GRSREFHLVD GGVAANNPTM VAMSMLTKEV LRRNPDFNAG RPTEYTNYLI ISVGTGSAKQ AEKYTAPQCA KWGLFQWLYN GGFTPIIDIF
301: SHASSDMVDI HAAVLFQALH CEKNYLRIQD DTLIGNTSSV DIATKENMES LIGIGQDLLK KPVARVNIDT GVYEPCSGEG TNAEALAHFA KKLSDERKLR
401: KRNLDSY
001: MDTERGSISS SEISRTAHLQ DRTVACLPPS YGQLVTILSI DGGGIRGIIP GTILAYLESQ LQELDGEEAR LVDYFDVISG TSTGGLIVAM LTAQDQSGGH
101: SRNSNRPLFE AKEIVPFYLK HSPKIFPQPR GIFCGWGETI VRLVGGPKFN GKYLHDLVEG FLGDTKLTQS LTNVVIPCFD IKKLQPVIFS SYQAVNNQAM
201: NAKLSDICIS TSAAPTFFPA HRFTNEDSEG IKHEFNLIDG GIAANNPTLC AIAEVTKQII KKNPVMGDIS PLDFTRFLVI SIGTGSIRNQ EKYNAKMASK
301: WGLMCWVFES GSTPILDCYS EAIHDMVDYQ SSVVFQALRS EKNYLRIDDD SLKGDLGSVD ISTEKNMEGL VEVGEALLKK RVSRVNLESG HYQPISENVT
401: NEEALKRFAK VLSEERKLRE SRSPKLKI
101: SRNSNRPLFE AKEIVPFYLK HSPKIFPQPR GIFCGWGETI VRLVGGPKFN GKYLHDLVEG FLGDTKLTQS LTNVVIPCFD IKKLQPVIFS SYQAVNNQAM
201: NAKLSDICIS TSAAPTFFPA HRFTNEDSEG IKHEFNLIDG GIAANNPTLC AIAEVTKQII KKNPVMGDIS PLDFTRFLVI SIGTGSIRNQ EKYNAKMASK
301: WGLMCWVFES GSTPILDCYS EAIHDMVDYQ SSVVFQALRS EKNYLRIDDD SLKGDLGSVD ISTEKNMEGL VEVGEALLKK RVSRVNLESG HYQPISENVT
401: NEEALKRFAK VLSEERKLRE SRSPKLKI
Arabidopsis Description
PLP3Patatin-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O23181]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.