Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- vacuole 2
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G313800.1 | Wheat | cytosol | 94.83 | 94.83 |
| TraesCS1D01G302900.1 | Wheat | cytosol | 94.33 | 94.57 |
| TraesCS1A01G303400.1 | Wheat | cytosol | 93.84 | 93.84 |
| HORVU1Hr1G012140.1 | Barley | plastid | 83.99 | 83.58 |
| HORVU7Hr1G036460.1 | Barley | plasma membrane | 88.18 | 78.34 |
| EES08841 | Sorghum | cytosol | 77.34 | 76.03 |
| Os11t0614400-01 | Rice | plasma membrane | 77.83 | 75.78 |
| Zm00001d007604_P001 | Maize | cytosol, peroxisome, plastid | 75.37 | 75.18 |
| Zm00001d007620_P001 | Maize | cytosol, peroxisome, plastid | 75.12 | 74.94 |
| EES10106 | Sorghum | plastid | 75.62 | 74.88 |
| EES08840 | Sorghum | cytosol | 74.63 | 74.81 |
| Zm00001d007618_P001 | Maize | mitochondrion | 74.88 | 74.69 |
| Zm00001d007616_P001 | Maize | cytosol, peroxisome, plastid | 74.88 | 74.69 |
| Zm00001d007623_P002 | Maize | mitochondrion | 75.37 | 73.21 |
| Zm00001d048841_P001 | Maize | mitochondrion, plasma membrane | 73.15 | 72.44 |
| Os11t0614500-02 | Rice | cytosol | 42.61 | 70.61 |
| HORVU5Hr1G069130.5 | Barley | cytosol | 52.71 | 52.84 |
| HORVU4Hr1G075070.7 | Barley | plastid | 56.4 | 52.64 |
| HORVU4Hr1G074970.1 | Barley | mitochondrion | 53.94 | 51.9 |
| HORVU7Hr1G113030.2 | Barley | plastid | 33.0 | 51.34 |
| HORVU2Hr1G037280.1 | Barley | cytosol | 32.27 | 50.78 |
| HORVU2Hr1G029000.2 | Barley | cytosol | 50.25 | 49.51 |
| HORVU5Hr1G119810.5 | Barley | cytosol | 46.8 | 49.22 |
| HORVU5Hr1G119820.1 | Barley | plastid | 47.78 | 48.87 |
| HORVU7Hr1G113080.1 | Barley | cytosol | 54.93 | 47.75 |
| HORVU3Hr1G004220.4 | Barley | cytosol, plastid | 56.16 | 47.5 |
| HORVU2Hr1G060260.1 | Barley | plastid | 31.53 | 46.55 |
| HORVU3Hr1G101170.1 | Barley | mitochondrion, plastid | 22.91 | 46.27 |
| HORVU4Hr1G050060.10 | Barley | plastid | 29.31 | 46.12 |
| HORVU7Hr1G006840.3 | Barley | cytosol | 31.28 | 43.79 |
| HORVU6Hr1G027900.2 | Barley | cytosol | 36.21 | 42.86 |
| HORVU4Hr1G019140.24 | Barley | cytosol | 22.91 | 42.86 |
| HORVU6Hr1G001990.1 | Barley | cytosol | 43.1 | 38.89 |
| HORVU2Hr1G126660.1 | Barley | cytosol, nucleus | 41.63 | 30.02 |
| HORVU5Hr1G093250.4 | Barley | cytosol | 22.17 | 20.0 |
| HORVU0Hr1G008670.3 | Barley | cytosol | 19.7 | 19.8 |
| HORVU5Hr1G103060.1 | Barley | mitochondrion | 23.15 | 19.79 |
| HORVU2Hr1G126570.1 | Barley | extracellular | 17.24 | 19.61 |
| HORVU5Hr1G011400.6 | Barley | mitochondrion | 19.95 | 18.08 |
| HORVU7Hr1G106600.4 | Barley | cytosol | 9.36 | 14.79 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G069200.2 | EnsemblPlantsGene:HORVU1Hr1G069200 | Gene3D:3.40.1090.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0016042 | GO:GO:0016787 | InterPro:Acyl_Trfase/lysoPLipase |
| InterPro:IPR002641 | InterPro:PNPLA_dom | PANTHER:PTHR32176 | PANTHER:PTHR32176:SF10 | PFAM:PF01734 | PFscan:PS51635 |
| SEG:seg | SUPFAM:SSF52151 | UniParc:UPI000296037C | UniProt:M0YZ28 | MapMan:5.7.2.2.3 | : |
Description
Patatin [Source:UniProtKB/TrEMBL;Acc:M0YZ28]
Coordinates
chrchr1H:-:483513662..483515481
Molecular Weight (calculated)
44498.3 Da
IEP (calculated)
5.886
GRAVY (calculated)
-0.184
Length
406 amino acids
Sequence
(BLAST)
(BLAST)
001: MCSGADTTMP CPPPSQGRLI TVLSIDGGGI RGLIPSTILA CLESKLQELD GPDARIADYF DVIAGTSTGA LVTSMLAAPG ENKRPLFAAK DINQFYLENG
101: PKIFPQRRWG FLTPVANLFG AVMGPKYDGK FLHDKIKNLT NDVTVADTVT NIIVPTFDIK YLQPVFFNTY EAKVDPQKNA HLSDICISTS AAPTYFPAHH
201: FTIPDPLGKM PDREYHLIDG GVAANNPTMV AMSMITQEVM RRNPDFTLGK PAEYGNYLII SIGTGTAKQA EKYSALDCAK WGVLRWLKDG RFTPLLDIFS
301: HASADMVDIH ATVLFQSLGI EKNYLRIQDD SLTGHTSSVD ISTKENMDAL IGIGNKLLKT SVARVNIDTG MYEPVDDEGT NEEALARFAK KLSDERKLRQ
401: TNLNSQ
101: PKIFPQRRWG FLTPVANLFG AVMGPKYDGK FLHDKIKNLT NDVTVADTVT NIIVPTFDIK YLQPVFFNTY EAKVDPQKNA HLSDICISTS AAPTYFPAHH
201: FTIPDPLGKM PDREYHLIDG GVAANNPTMV AMSMITQEVM RRNPDFTLGK PAEYGNYLII SIGTGTAKQA EKYSALDCAK WGVLRWLKDG RFTPLLDIFS
301: HASADMVDIH ATVLFQSLGI EKNYLRIQDD SLTGHTSSVD ISTKENMDAL IGIGNKLLKT SVARVNIDTG MYEPVDDEGT NEEALARFAK KLSDERKLRQ
401: TNLNSQ
001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI
Arabidopsis Description
PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.