Factsheet for HORVU2Hr1G029000.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G166800.1	Wheat	cytosol	93.2	94.58
TraesCS2A01G159600.1	Wheat	cytosol	92.96	94.33
TraesCS2B01G185200.1	Wheat	cytosol	92.48	93.61
HORVU2Hr1G037280.1	Barley	cytosol	58.25	93.02
OQU80645	Sorghum	cytosol	73.79	75.81
HORVU5Hr1G119820.1	Barley	plastid	70.63	73.3
HORVU5Hr1G119810.5	Barley	cytosol	67.48	72.02
Zm00001d031815_P001	Maize	cytosol	72.57	68.11
Os08t0477500-01	Rice	plasma membrane	42.48	65.06
Zm00001d031814_P001	Maize	cytosol, plasma membrane, plastid	65.29	63.9
OQU80643	Sorghum	cytosol	70.63	59.15
VIT_00s0567g00050.t01	Wine grape	cytosol	29.85	57.75
KRH61261	Soybean	cytosol, peroxisome, plastid	30.58	56.0
VIT_00s0567g00060.t01	Wine grape	cytosol	50.73	55.88
HORVU5Hr1G069130.5	Barley	cytosol	51.94	52.84
Solyc04g079220.1.1	Tomato	cytosol	9.47	52.0
HORVU1Hr1G069200.2	Barley	cytosol	49.51	50.25
HORVU1Hr1G012140.1	Barley	plastid	49.27	49.75
HORVU7Hr1G113030.2	Barley	plastid	31.07	49.04
HORVU4Hr1G075070.7	Barley	plastid	51.7	48.97
HORVU4Hr1G074970.1	Barley	mitochondrion	49.76	48.58
Solyc02g065090.2.1	Tomato	nucleus	49.51	48.57
Solyc02g090490.2.1	Tomato	extracellular	48.54	48.54
Solyc02g065100.1.1	Tomato	endoplasmic reticulum, extracellular	48.06	48.18
PGSC0003DMT400025955	Potato	extracellular	48.06	48.06
Solyc03g044710.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	47.57	47.8
PGSC0003DMT400002016	Potato	cytosol	29.85	47.67
PGSC0003DMT400002019	Potato	golgi, vacuole	48.3	47.38
HORVU4Hr1G019140.24	Barley	cytosol	24.03	45.62
Solyc04g079210.2.1	Tomato	cytosol	17.72	45.06
HORVU6Hr1G027900.2	Barley	cytosol	37.14	44.61
PGSC0003DMT400058995	Potato	cytosol	17.23	44.38
HORVU7Hr1G036460.1	Barley	plasma membrane	48.79	43.98
HORVU3Hr1G004220.4	Barley	cytosol, plastid	51.21	43.96
HORVU7Hr1G006840.3	Barley	cytosol	30.83	43.79
HORVU3Hr1G101170.1	Barley	mitochondrion, plastid	21.36	43.78
HORVU2Hr1G060260.1	Barley	plastid	29.13	43.64
HORVU4Hr1G050060.10	Barley	plastid	27.18	43.41
HORVU7Hr1G113080.1	Barley	cytosol	48.79	43.04
VIT_00s0567g00040.t01	Wine grape	cytosol	16.5	41.98
HORVU6Hr1G001990.1	Barley	cytosol	33.5	30.67
HORVU2Hr1G126660.1	Barley	cytosol, nucleus	40.29	29.48
HORVU2Hr1G126570.1	Barley	extracellular	18.69	21.57
HORVU5Hr1G103060.1	Barley	mitochondrion	24.51	21.26
HORVU0Hr1G008670.3	Barley	cytosol	19.9	20.3
HORVU5Hr1G093250.4	Barley	cytosol	21.12	19.33
HORVU5Hr1G011400.6	Barley	mitochondrion	20.39	18.75
HORVU7Hr1G106600.4	Barley	cytosol	9.95	15.95

Protein Annotations

EnsemblPlants:HORVU2Hr1G029000.2	EnsemblPlantsGene:HORVU2Hr1G029000	Gene3D:3.40.1090.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016042	GO:GO:0016787	InterPro:Acyl_Trfase/lysoPLipase
InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32176	PANTHER:PTHR32176:SF7	PFAM:PF01734	PFscan:PS51635
SUPFAM:SSF52151	UniParc:UPI000B483082	UniProt:A0A287HIQ0	MapMan:5.7.2.2.3	:	:

Description

Patatin [Source:UniProtKB/TrEMBL;Acc:A0A287HIQ0]

Coordinates

chrchr2H:+:99736854..99739065

Molecular Weight (calculated)

45140.9 Da

IEP (calculated)

7.181

GRAVY (calculated)

-0.245

Length

412 amino acids

Sequence
(BLAST)

001: MASSSSAEEG ERQNSADKDK LITVLSIDGG GVRGIIPATI LGFLGEEFKK LDGPEARIAD YFDVIAGTST GGLLTVMLTA PDKNGRPLFD AKELAQFYMD
101: ESPKIFPQNC RNSFFGKIAT ALKMVRGPKY NGKYLHALLR RHLGETKLDR TLTNVVIPTF DIAYLQPSIF SSFQLKHSPA KNALLSDIAI STSAAPTFFP
201: AHYFETKDDK GEPRAFNLID GGLAANNPTL CAMSQVSQDI IVGDGEFFVQ NPVDYGKFMI VSIGCGLNPK ESYSAKDTAK WGILNWIVKD GTTPIVDMFN
301: AASADMVDIH LSVLFGALRS SHRYLRIQYD QLSGSAGSID DCSKENMDRL VQIGGELLRK NVSRVDLETG RNVEMPGQGT NAEQLAKFAK HLSDERRRRQ
401: KVLQINQQLA GS

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.