Factsheet for Solyc04g079220.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 2
mitochondrion 2
cytosol 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G407900.1	Wheat	cytosol	52.0	16.39
TraesCS3B01G036100.1	Wheat	cytosol	58.67	16.18
TraesCS7D01G491300.1	Wheat	plastid	54.67	15.95
HORVU7Hr1G113030.2	Barley	plastid	54.67	15.71
HORVU7Hr1G006840.3	Barley	cytosol	60.0	15.52
Os08t0376500-00	Rice	plastid	53.33	15.38
HORVU2Hr1G037280.1	Barley	cytosol	50.67	14.73
TraesCS3D01G033600.1	Wheat	mitochondrion, peroxisome	58.67	14.57
Os08t0477500-01	Rice	plasma membrane	52.0	14.5
Solyc04g079240.2.1	Tomato	nucleus	66.67	12.14
TraesCS6A01G142200.1	Wheat	cytosol	52.0	11.85
HORVU6Hr1G027900.2	Barley	cytosol	53.33	11.66
TraesCS7D01G034300.1	Wheat	mitochondrion	61.33	11.14
TraesCS7A01G504400.1	Wheat	cytoskeleton, cytosol, peroxisome	58.67	10.89
Solyc04g079250.2.1	Tomato	cytosol	58.67	10.86
TraesCS3D01G033500.1	Wheat	plastid	62.67	10.85
TraesCS3D01G033200.1	Wheat	plastid	62.67	10.85
TraesCS4A01G449600.1	Wheat	mitochondrion	61.33	10.85
TraesCS3B01G036800.1	Wheat	plastid	62.67	10.83
TraesCS3A01G046500.1	Wheat	plastid	61.33	10.62
TraesCS7A01G038300.1	Wheat	mitochondrion	60.0	10.61
TraesCS4A01G450400.1	Wheat	mitochondrion	60.0	10.61
Solyc04g079260.2.1	Tomato	cytosol	57.33	10.59
Os08t0476900-01	Rice	plastid	60.0	10.47
TraesCS5B01G529100.1	Wheat	cytosol	54.67	10.46
TraesCS5D01G528100.1	Wheat	cytosol	54.67	10.46
TraesCS1A01G407800.2	Wheat	cytosol	54.67	10.46
TraesCS3B01G036500.1	Wheat	plastid	61.33	10.36
TraesCS5B01G529000.1	Wheat	cytosol	54.67	10.33
TraesCS5D01G528000.1	Wheat	cytosol, peroxisome, plastid	54.67	10.25
OQU80645	Sorghum	cytosol	54.67	10.22
TraesCS7A01G504100.1	Wheat	plastid	57.33	10.19
TraesCS7D01G491900.1	Wheat	plastid	57.33	10.19
TraesCS7A01G504200.1	Wheat	mitochondrion	56.0	10.17
HORVU5Hr1G119820.1	Barley	plastid	53.33	10.08
TraesCS7B01G411800.1	Wheat	plastid	57.33	10.05
Os08t0477100-01	Rice	plastid	57.33	9.98
Zm00001d031814_P001	Maize	cytosol, plasma membrane, plastid	56.0	9.98
TraesCS7B01G411200.1	Wheat	plastid	56.0	9.95
TraesCS7D01G491200.1	Wheat	mitochondrion, plastid	56.0	9.95
TraesCS4A01G345300.1	Wheat	cytosol	53.33	9.95
Solyc02g090630.2.1	Tomato	cytosol	52.0	9.87
HORVU5Hr1G119810.5	Barley	cytosol	50.67	9.84
TraesCS4D01G285300.1	Wheat	plastid	56.0	9.7
TraesCS4B01G286600.1	Wheat	plastid	56.0	9.7
Zm00001d031813_P001	Maize	extracellular	56.0	9.66
HORVU4Hr1G075070.7	Barley	plastid	56.0	9.66
EES15134	Sorghum	plastid	56.0	9.66
KXG25325	Sorghum	plastid	56.0	9.61
TraesCS2D01G166800.1	Wheat	cytosol	52.0	9.61
TraesCS2A01G159600.1	Wheat	cytosol	52.0	9.61
HORVU3Hr1G004220.4	Barley	cytosol, plastid	61.33	9.58
TraesCS2B01G185200.1	Wheat	cytosol	52.0	9.58
TraesCS4A01G017400.1	Wheat	plastid	54.67	9.47
HORVU2Hr1G029000.2	Barley	cytosol	52.0	9.47
Solyc02g090490.2.1	Tomato	extracellular	52.0	9.47
Zm00001d031811_P001	Maize	plastid	54.67	9.4
TraesCS7B01G411300.1	Wheat	mitochondrion	52.0	9.31
Solyc02g065100.1.1	Tomato	endoplasmic reticulum, extracellular	50.67	9.25
HORVU7Hr1G113080.1	Barley	cytosol	57.33	9.21
TraesCS6B01G170200.1	Wheat	plastid	52.0	9.18
Zm00001d031815_P001	Maize	cytosol	53.33	9.11
Solyc02g090660.1.1	Tomato	cytosol, peroxisome, plastid	33.33	9.06
Solyc03g044710.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	49.33	9.02
TraesCS7A01G504700.1	Wheat	plastid	50.67	9.0
Solyc02g065090.2.1	Tomato	nucleus	49.33	8.81
OQU83677	Sorghum	cytosol	36.0	8.11
Solyc08g006850.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	40.0	7.96
OQU80643	Sorghum	cytosol	52.0	7.93
Solyc08g006860.2.1	Tomato	extracellular	40.0	7.83
Solyc09g065240.2.1	Tomato	cytosol	25.33	4.96
Solyc10g080690.1.1	Tomato	cytosol	24.0	4.17
Solyc10g078530.1.1	Tomato	cytosol	24.0	4.14
Solyc05g056030.2.1	Tomato	cytosol	24.0	3.86
Solyc04g079210.2.1	Tomato	cytosol	4.0	1.85
Os08t0376550-00	Rice	cytosol	2.67	1.1
TraesCS4A01G345400.1	Wheat	cytosol	1.33	0.47

Protein Annotations

EnsemblPlants:Solyc04g079220.1.1	EnsemblPlantsGene:Solyc04g079220.1	Gene3D:3.40.1090.10	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
InterPro:Acyl_Trfase/lysoPLipase	InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32176	PANTHER:PTHR32176:SF5	PFscan:PS51635
SUPFAM:SSF52151	UniParc:UPI0002766FDD	UniProt:K4BV06	MapMan:35.1	:	:

Description

Patatin [Source:UniProtKB/TrEMBL;Acc:K4BV06]

Coordinates

chr4:-:63753735..63754042

Molecular Weight (calculated)

8260.8 Da

IEP (calculated)

6.218

GRAVY (calculated)

-0.059

Length

75 amino acids

Sequence
(BLAST)

1: MQPTIFSTFE AKKHSIMNAK LSDICIGTSA APTYLPAHNF QTQNEDGKFH EFNLIDGAIA ANNPVLNSLT YFISL

Best Arabidopsis Sequence Match ( AT4G37050.1 )
(BLAST)

001: MDTERGSISS SEISRTAHLQ DRTVACLPPS YGQLVTILSI DGGGIRGIIP GTILAYLESQ LQELDGEEAR LVDYFDVISG TSTGGLIVAM LTAQDQSGGH
101: SRNSNRPLFE AKEIVPFYLK HSPKIFPQPR GIFCGWGETI VRLVGGPKFN GKYLHDLVEG FLGDTKLTQS LTNVVIPCFD IKKLQPVIFS SYQAVNNQAM
201: NAKLSDICIS TSAAPTFFPA HRFTNEDSEG IKHEFNLIDG GIAANNPTLC AIAEVTKQII KKNPVMGDIS PLDFTRFLVI SIGTGSIRNQ EKYNAKMASK
301: WGLMCWVFES GSTPILDCYS EAIHDMVDYQ SSVVFQALRS EKNYLRIDDD SLKGDLGSVD ISTEKNMEGL VEVGEALLKK RVSRVNLESG HYQPISENVT
401: NEEALKRFAK VLSEERKLRE SRSPKLKI

Arabidopsis Description

PLP3Patatin-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O23181]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.