Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- plastid 2
- vacuole 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 1
- golgi 1
- peroxisome 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400040802 | Potato | mitochondrion | 31.52 | 58.0 |
Solyc04g079250.2.1 | Tomato | cytosol | 49.28 | 33.58 |
Solyc04g079220.1.1 | Tomato | cytosol | 9.06 | 33.33 |
Solyc02g090630.2.1 | Tomato | cytosol | 46.74 | 32.66 |
Solyc04g079260.2.1 | Tomato | cytosol | 47.46 | 32.27 |
Solyc03g044710.2.1 | Tomato | endoplasmic reticulum, golgi, vacuole | 47.46 | 31.95 |
Solyc02g090490.2.1 | Tomato | extracellular | 46.74 | 31.31 |
Solyc04g079240.2.1 | Tomato | nucleus | 46.38 | 31.07 |
Solyc02g065090.2.1 | Tomato | nucleus | 46.74 | 30.71 |
Solyc02g065100.1.1 | Tomato | endoplasmic reticulum, extracellular | 45.29 | 30.41 |
Os01t0898500-01 | Rice | plastid | 43.48 | 29.2 |
OQU88041 | Sorghum | cytosol | 42.39 | 28.33 |
Zm00001d042504_P002 | Maize | cytosol | 40.58 | 26.6 |
Solyc08g006850.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 36.23 | 26.53 |
Solyc08g006860.2.1 | Tomato | extracellular | 34.42 | 24.8 |
Solyc10g080690.1.1 | Tomato | cytosol | 24.64 | 15.74 |
Solyc10g078530.1.1 | Tomato | cytosol | 24.28 | 15.4 |
Solyc09g065240.2.1 | Tomato | cytosol | 21.01 | 15.14 |
Solyc05g056030.2.1 | Tomato | cytosol | 25.36 | 15.02 |
Solyc04g079210.2.1 | Tomato | cytosol | 8.7 | 14.81 |
Protein Annotations
Gene3D:3.40.1090.10 | MapMan:5.7.2.2.3 | InterPro:Acyl_Trfase/lysoPLipase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004620 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006629 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0009056 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016042 | GO:GO:0016787 |
GO:GO:0047372 | InterPro:IPR002641 | UniProt:K4BCL5 | PFAM:PF01734 | InterPro:PNPLA_dom | PFscan:PS51635 |
PANTHER:PTHR32176 | PANTHER:PTHR32176:SF6 | SUPFAM:SSF52151 | EnsemblPlantsGene:Solyc02g090660.1 | EnsemblPlants:Solyc02g090660.1.1 | TMHMM:TMhelix |
UniParc:UPI00027675ED | SEG:seg | : | : | : | : |
Description
Patatin [Source:UniProtKB/TrEMBL;Acc:K4BCL5]
Coordinates
chr2:-:52198634..52199970
Molecular Weight (calculated)
30695.6 Da
IEP (calculated)
5.359
GRAVY (calculated)
0.187
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MERYGERITV LSIDGGGVRG IIPGTILSFL ESKLQELDGQ EARLADYFDI IIAGSSTGGL MATMLTTWPS SLCSQVKLWS IIFYVVINCS IASALIRMLW
101: GPKYDGKYLR NLIRRILGNR RLHETITHLL IPTYDIKTLE PQIFSSYEVL KFTSLHLFLQ KENSFSSILT NAGHGFDALL SDICVGTSSI IMEMIDLIDG
201: GIAANNPALL AMRPTGAKAN LLPENVLDLW QMENLVKIGN NILQKPISRM NLETCINEAV ENEVTNEQAL IRFLSN
101: GPKYDGKYLR NLIRRILGNR RLHETITHLL IPTYDIKTLE PQIFSSYEVL KFTSLHLFLQ KENSFSSILT NAGHGFDALL SDICVGTSSI IMEMIDLIDG
201: GIAANNPALL AMRPTGAKAN LLPENVLDLW QMENLVKIGN NILQKPISRM NLETCINEAV ENEVTNEQAL IRFLSN
001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI
Arabidopsis Description
PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.