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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • plastid 2
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 1
  • golgi 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400040802 Potato mitochondrion 31.52 58.0
Solyc04g079250.2.1 Tomato cytosol 49.28 33.58
Solyc04g079220.1.1 Tomato cytosol 9.06 33.33
Solyc02g090630.2.1 Tomato cytosol 46.74 32.66
Solyc04g079260.2.1 Tomato cytosol 47.46 32.27
Solyc03g044710.2.1 Tomato endoplasmic reticulum, golgi, vacuole 47.46 31.95
Solyc02g090490.2.1 Tomato extracellular 46.74 31.31
Solyc04g079240.2.1 Tomato nucleus 46.38 31.07
Solyc02g065090.2.1 Tomato nucleus 46.74 30.71
Solyc02g065100.1.1 Tomato endoplasmic reticulum, extracellular 45.29 30.41
Os01t0898500-01 Rice plastid 43.48 29.2
OQU88041 Sorghum cytosol 42.39 28.33
Zm00001d042504_P002 Maize cytosol 40.58 26.6
Solyc08g006850.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 36.23 26.53
Solyc08g006860.2.1 Tomato extracellular 34.42 24.8
Solyc10g080690.1.1 Tomato cytosol 24.64 15.74
Solyc10g078530.1.1 Tomato cytosol 24.28 15.4
Solyc09g065240.2.1 Tomato cytosol 21.01 15.14
Solyc05g056030.2.1 Tomato cytosol 25.36 15.02
Solyc04g079210.2.1 Tomato cytosol 8.7 14.81
Protein Annotations
Gene3D:3.40.1090.10MapMan:5.7.2.2.3InterPro:Acyl_Trfase/lysoPLipaseGO:GO:0003674GO:GO:0003824GO:GO:0004620
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006629GO:GO:0008150
GO:GO:0008152GO:GO:0009056GO:GO:0016020GO:GO:0016021GO:GO:0016042GO:GO:0016787
GO:GO:0047372InterPro:IPR002641UniProt:K4BCL5PFAM:PF01734InterPro:PNPLA_domPFscan:PS51635
PANTHER:PTHR32176PANTHER:PTHR32176:SF6SUPFAM:SSF52151EnsemblPlantsGene:Solyc02g090660.1EnsemblPlants:Solyc02g090660.1.1TMHMM:TMhelix
UniParc:UPI00027675EDSEG:seg::::
Description
Patatin [Source:UniProtKB/TrEMBL;Acc:K4BCL5]
Coordinates
chr2:-:52198634..52199970
Molecular Weight (calculated)
30695.6 Da
IEP (calculated)
5.359
GRAVY (calculated)
0.187
Length
276 amino acids
Sequence
(BLAST)
001: MERYGERITV LSIDGGGVRG IIPGTILSFL ESKLQELDGQ EARLADYFDI IIAGSSTGGL MATMLTTWPS SLCSQVKLWS IIFYVVINCS IASALIRMLW
101: GPKYDGKYLR NLIRRILGNR RLHETITHLL IPTYDIKTLE PQIFSSYEVL KFTSLHLFLQ KENSFSSILT NAGHGFDALL SDICVGTSSI IMEMIDLIDG
201: GIAANNPALL AMRPTGAKAN LLPENVLDLW QMENLVKIGN NILQKPISRM NLETCINEAV ENEVTNEQAL IRFLSN
Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)
001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI
Arabidopsis Description
PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.