Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- mitochondrion 4
- vacuole 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g090660.1.1 | Tomato | cytosol, peroxisome, plastid | 58.0 | 31.52 |
| PGSC0003DMT400044057 | Potato | cytosol | 17.33 | 27.08 |
| PGSC0003DMT400002016 | Potato | cytosol | 36.0 | 20.93 |
| PGSC0003DMT400036586 | Potato | cytosol | 32.0 | 20.69 |
| PGSC0003DMT400044046 | Potato | cytosol | 36.67 | 20.0 |
| PGSC0003DMT400040781 | Potato | cytosol | 51.33 | 19.3 |
| PGSC0003DMT400002019 | Potato | golgi, vacuole | 44.67 | 15.95 |
| Os01t0898500-01 | Rice | plastid | 43.33 | 15.82 |
| PGSC0003DMT400022567 | Potato | extracellular | 36.67 | 15.8 |
| PGSC0003DMT400025955 | Potato | extracellular | 43.33 | 15.78 |
| OQU88041 | Sorghum | cytosol | 42.0 | 15.25 |
| Zm00001d042504_P002 | Maize | cytosol | 41.33 | 14.73 |
| PGSC0003DMT400058995 | Potato | cytosol | 15.33 | 14.38 |
| PGSC0003DMT400044055 | Potato | cytosol | 34.0 | 14.01 |
| PGSC0003DMT400060932 | Potato | cytosol | 26.67 | 9.32 |
| PGSC0003DMT400021555 | Potato | cytosol | 25.33 | 8.74 |
| PGSC0003DMT400033524 | Potato | cytosol | 21.33 | 8.44 |
| PGSC0003DMT400051868 | Potato | cytosol | 21.33 | 8.38 |
| PGSC0003DMT400060317 | Potato | cytosol | 24.0 | 7.73 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400040802 | EnsemblPlantsGene:PGSC0003DMG400015777 | Gene3D:3.40.1090.10 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 |
| InterPro:Acyl_Trfase/lysoPLipase | InterPro:IPR002641 | InterPro:PNPLA_dom | PANTHER:PTHR32176 | PANTHER:PTHR32176:SF6 | PFscan:PS51635 |
| PGSC:PGSC0003DMG400015777 | SUPFAM:SSF52151 | UniParc:UPI000295A921 | UniProt:M1BAF9 | MapMan:35.1 | : |
Description
Patatin class 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400015777]
Coordinates
chr2:+:44000946..44001627
Molecular Weight (calculated)
16550.3 Da
IEP (calculated)
8.785
GRAVY (calculated)
0.127
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MVTLLSMMLC GPKYDGKYLR NLIRGILGNR RLHETITHLL IPTYDIKTLE PQIFSSSEAK MDPGFDALLS DICIGTSSAP ALLAMRPTGA KANLLPANVL
101: DYDKYLVLSV GTGTSKSERK YDAAKWGLIS WLYKDGKCPL VDAFTFVLAF
101: DYDKYLVLSV GTGTSKSERK YDAAKWGLIS WLYKDGKCPL VDAFTFVLAF
001: MENKSPSKKN KPPSCGSLVT ILSLDGGGVR GIIAGVILAF LEKQLQELDG EEARLADYFD VIAGTSTGGL VTAMLTVPDE TGRPHFAAKD IVPFYLEHCP
101: KIFPQPTGVL ALLPKLPKLL SGPKYSGKYL RNLLSKLLGE TRLHQTLTNI VIPTFDIKKL QPTIFSSYQL LVDPSLDVKV SDICIGTSAA PTFFPPHYFS
201: NEDSQGNKTE FNLVDGAVTA NNPTLVAMTA VSKQIVKNNP DMGKLKPLGF DRFLVISIGT GSTKREEKYS AKKAAKWGII SWLYDDGSTP ILDITMESSR
301: DMIHYHSSVV FKALQSEDKY LRIDDDTLEG DVSTMDLATK SNLENLQKIG EKMLTNRVMQ MNIDTGVYEP VAENITNDEQ LKR
101: KIFPQPTGVL ALLPKLPKLL SGPKYSGKYL RNLLSKLLGE TRLHQTLTNI VIPTFDIKKL QPTIFSSYQL LVDPSLDVKV SDICIGTSAA PTFFPPHYFS
201: NEDSQGNKTE FNLVDGAVTA NNPTLVAMTA VSKQIVKNNP DMGKLKPLGF DRFLVISIGT GSTKREEKYS AKKAAKWGII SWLYDDGSTP ILDITMESSR
301: DMIHYHSSVV FKALQSEDKY LRIDDDTLEG DVSTMDLATK SNLENLQKIG EKMLTNRVMQ MNIDTGVYEP VAENITNDEQ LKR
Arabidopsis Description
PLP1Patatin [Source:UniProtKB/TrEMBL;Acc:A0A178UVZ8]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.