Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- vacuole 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g080690.1.1 | Tomato | cytosol | 94.87 | 94.21 |
| PGSC0003DMT400021555 | Potato | cytosol | 74.59 | 73.56 |
| VIT_10s0092g00150.t01 | Wine grape | cytosol | 64.57 | 64.87 |
| KRH36757 | Soybean | cytosol | 64.1 | 63.36 |
| KRH11757 | Soybean | cytosol | 62.47 | 62.04 |
| TraesCS5D01G430400.1 | Wheat | cytosol | 48.48 | 52.93 |
| TraesCS5B01G424100.1 | Wheat | cytosol | 47.79 | 52.16 |
| TraesCS5A01G422200.1 | Wheat | cytosol | 47.79 | 51.38 |
| GSMUA_Achr5P02370_001 | Banana | cytosol | 46.39 | 50.64 |
| GSMUA_Achr8P07160_001 | Banana | cytosol | 44.29 | 50.26 |
| TraesCS5A01G422000.1 | Wheat | cytosol | 49.88 | 48.53 |
| TraesCS5B01G423900.1 | Wheat | cytosol | 50.12 | 48.42 |
| GSMUA_Achr11P... | Banana | cytosol | 31.0 | 47.5 |
| GSMUA_AchrUn_... | Banana | cytosol | 38.93 | 46.26 |
| Zm00001d034340_P001 | Maize | cytosol | 46.62 | 45.66 |
| GSMUA_Achr5P26630_001 | Banana | cytosol | 36.6 | 45.51 |
| EER90785 | Sorghum | cytosol | 47.55 | 45.43 |
| TraesCS7B01G364900.1 | Wheat | cytosol | 42.42 | 44.94 |
| Os03t0784100-00 | Rice | cytosol | 49.18 | 44.89 |
| TraesCS5D01G430300.1 | Wheat | plastid | 50.12 | 44.79 |
| HORVU5Hr1G103060.1 | Barley | mitochondrion | 49.42 | 44.63 |
| Zm00001d014386_P001 | Maize | cytosol, plastid | 42.42 | 44.61 |
| TraesCS7A01G464400.1 | Wheat | cytosol | 42.42 | 44.5 |
| GSMUA_Achr2P01360_001 | Banana | cytosol | 41.26 | 44.36 |
| PGSC0003DMT400060317 | Potato | cytosol | 47.09 | 43.35 |
| Os03t0640000-00 | Rice | cytosol | 44.52 | 43.31 |
| TraesCS7D01G452000.1 | Wheat | cytosol | 42.19 | 43.2 |
| TraesCSU01G072800.1 | Wheat | cytosol | 44.29 | 43.18 |
| TraesCS5D01G385900.1 | Wheat | cytosol | 44.52 | 43.12 |
| Zm00001d033254_P001 | Maize | cytosol | 42.89 | 42.89 |
| HORVU5Hr1G093250.4 | Barley | cytosol | 44.29 | 42.22 |
| Zm00001d041481_P001 | Maize | cytosol | 44.06 | 41.63 |
| OQU91280 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 41.96 | 41.47 |
| HORVU7Hr1G106600.4 | Barley | cytosol | 24.71 | 41.25 |
| PGSC0003DMT400033524 | Potato | cytosol | 36.36 | 41.16 |
| EER93762 | Sorghum | plastid | 42.42 | 40.9 |
| Zm00001d000203_P001 | Maize | cytosol | 42.42 | 40.9 |
| Zm00001d018788_P001 | Maize | nucleus | 44.29 | 40.77 |
| TraesCS5D01G057600.1 | Wheat | cytosol, peroxisome, plastid | 45.45 | 40.62 |
| EER91181 | Sorghum | plastid | 43.59 | 40.56 |
| Zm00001d033256_P001 | Maize | cytosol | 41.72 | 40.41 |
| TraesCS5B01G052000.1 | Wheat | cytosol, peroxisome, plastid | 45.22 | 40.08 |
| TraesCS5A01G047000.1 | Wheat | cytosol, peroxisome, plastid | 44.99 | 39.96 |
| OQU79585 | Sorghum | cytosol | 44.99 | 39.88 |
| PGSC0003DMT400051868 | Potato | cytosol | 35.2 | 39.53 |
| EER97967 | Sorghum | nucleus | 44.99 | 39.23 |
| TraesCS5B01G379300.1 | Wheat | plastid | 44.29 | 39.18 |
| GSMUA_Achr6P31310_001 | Banana | cytosol | 42.89 | 39.15 |
| HORVU5Hr1G011400.6 | Barley | mitochondrion | 40.79 | 39.06 |
| EER90215 | Sorghum | plastid | 42.42 | 38.64 |
| Os06t0677000-00 | Rice | plastid | 40.56 | 36.17 |
| Os07t0144500-00 | Rice | mitochondrion, plastid | 31.7 | 32.69 |
| Zm00001d031053_P001 | Maize | plastid | 41.72 | 32.02 |
| GSMUA_Achr4P31750_001 | Banana | cytosol | 48.48 | 30.5 |
| GSMUA_AchrUn_... | Banana | plastid | 30.54 | 29.77 |
| Os12t0611300-00 | Rice | cytosol, peroxisome, plastid | 36.13 | 29.69 |
| PGSC0003DMT400025955 | Potato | extracellular | 26.57 | 27.67 |
| PGSC0003DMT400040802 | Potato | mitochondrion | 9.32 | 26.67 |
| PGSC0003DMT400044057 | Potato | cytosol | 5.83 | 26.04 |
| PGSC0003DMT400002019 | Potato | golgi, vacuole | 25.41 | 25.95 |
| PGSC0003DMT400002016 | Potato | cytosol | 14.92 | 24.81 |
| PGSC0003DMT400040781 | Potato | cytosol | 22.38 | 24.06 |
| PGSC0003DMT400044046 | Potato | cytosol | 14.45 | 22.55 |
| PGSC0003DMT400044055 | Potato | cytosol | 18.41 | 21.7 |
| PGSC0003DMT400058995 | Potato | cytosol | 7.93 | 21.25 |
| PGSC0003DMT400022567 | Potato | extracellular | 16.78 | 20.69 |
| PGSC0003DMT400036586 | Potato | cytosol | 10.02 | 18.53 |
Protein Annotations
| EntrezGene:102602735 | Gene3D:3.40.1090.10 | MapMan:5.7.2.2.4 | InterPro:Acyl_Trfase/lysoPLipase | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0016042 | GO:GO:0016787 |
| InterPro:IPR002641 | UniProt:M1C6Q0 | PFAM:PF01734 | EnsemblPlantsGene:PGSC0003DMG400023699 | PGSC:PGSC0003DMG400023699 | EnsemblPlants:PGSC0003DMT400060932 |
| InterPro:PNPLA_dom | PFscan:PS51635 | PANTHER:PTHR32241 | PANTHER:PTHR32241:SF6 | SUPFAM:SSF52151 | UniParc:UPI000296A327 |
| RefSeq:XP_006351364.1 | SEG:seg | : | : | : | : |
Description
Patatin B2 [Source:PGSC_GENE;Acc:PGSC0003DMG400023699]
Coordinates
chr10:-:57287402..57289769
Molecular Weight (calculated)
46399.0 Da
IEP (calculated)
8.693
GRAVY (calculated)
-0.101
Length
429 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAAISTIS MIDSNMEVDK LTYEIFSILE NKFLFGYDND PKLSSACVDN LNFSTPKKNV PAGKIRILSI DGGGSTNGIL AAKSLTHLET TLRRITGKKN
101: THIADFFDVV AGSGTGGILA TLLFTRGKDG VPLFTAEEAL KFLIENNRKI SRSSSNGVLQ RVFRPPVKVF GKVFGDLTLK ETVKAVLIPC YDLTTRSPFL
201: FSRADALEMD GCDFKLSDVC GATIADRTVE VKSVDGRRKI TAVGGGVTMN NPTAAAITHV LNNKQEFPFA NSVEDLLVIS LGNGESDSGT GNMTSSPAAF
301: VKIAGDGAAD MVDQAVSMAF GEFRNNNYVR VQGNEIIGKK QHMIKDEKMR KSIVIAEEML KQKNVESILF QGKKLVEKTN LDKLEIFAGE LIKEEEMRKN
401: SILSPVVLKQ SPSSPRTSSA TTLSTISSC
101: THIADFFDVV AGSGTGGILA TLLFTRGKDG VPLFTAEEAL KFLIENNRKI SRSSSNGVLQ RVFRPPVKVF GKVFGDLTLK ETVKAVLIPC YDLTTRSPFL
201: FSRADALEMD GCDFKLSDVC GATIADRTVE VKSVDGRRKI TAVGGGVTMN NPTAAAITHV LNNKQEFPFA NSVEDLLVIS LGNGESDSGT GNMTSSPAAF
301: VKIAGDGAAD MVDQAVSMAF GEFRNNNYVR VQGNEIIGKK QHMIKDEKMR KSIVIAEEML KQKNVESILF QGKKLVEKTN LDKLEIFAGE LIKEEEMRKN
401: SILSPVVLKQ SPSSPRTSSA TTLSTISSC
001: MLTTMQRVHN KPIDSIGGFK HLVKQSNGGD GGVTATDMQE PSIETDKLSY EIFSILESKF LFGYDDDLKL MESRSRDPSP EQETASPAMV EALNGVVPGT
101: VKNQRGKVCV LSIDSGGMRG IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED TWRFLAMKGK SFYNKSPPGI
201: LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301: DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG
401: SSFGPCKPNI DTDASPSNVN MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SGDRRVDQQT IFKDIDCMF
101: VKNQRGKVCV LSIDSGGMRG IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED TWRFLAMKGK SFYNKSPPGI
201: LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301: DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG
401: SSFGPCKPNI DTDASPSNVN MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SGDRRVDQQT IFKDIDCMF
Arabidopsis Description
PLP6Patatin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O80959]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.